Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Rc3h1Q4VGL6 Ank2-226ENSMUST00000189368 339 ntBASIC19.7■□□□□ 0.74
Rc3h1Q4VGL6 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Rc3h1Q4VGL6 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rc3h1Q4VGL6 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rc3h1Q4VGL6 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rc3h1Q4VGL6 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
Rc3h1Q4VGL6 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rc3h1Q4VGL6 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Rc3h1Q4VGL6 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Rc3h1Q4VGL6 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rc3h1Q4VGL6 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rc3h1Q4VGL6 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rc3h1Q4VGL6 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rc3h1Q4VGL6 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rc3h1Q4VGL6 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rc3h1Q4VGL6 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rc3h1Q4VGL6 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rc3h1Q4VGL6 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rc3h1Q4VGL6 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rc3h1Q4VGL6 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rc3h1Q4VGL6 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rc3h1Q4VGL6 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rc3h1Q4VGL6 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rc3h1Q4VGL6 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rc3h1Q4VGL6 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rc3h1Q4VGL6 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rc3h1Q4VGL6 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Rc3h1Q4VGL6 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rc3h1Q4VGL6 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rc3h1Q4VGL6 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.68■□□□□ 0.74
Rc3h1Q4VGL6 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Rc3h1Q4VGL6 Mir770-201ENSMUST00000103252 94 ntBASIC19.68■□□□□ 0.74
Rc3h1Q4VGL6 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Rc3h1Q4VGL6 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.68■□□□□ 0.74
Rc3h1Q4VGL6 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.68■□□□□ 0.74
Rc3h1Q4VGL6 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.68■□□□□ 0.74
Rc3h1Q4VGL6 Gm27704-201ENSMUST00000185094 107 ntBASIC19.68■□□□□ 0.74
Rc3h1Q4VGL6 Gm8969-201ENSMUST00000199694 526 ntBASIC19.68■□□□□ 0.74
Rc3h1Q4VGL6 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rc3h1Q4VGL6 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rc3h1Q4VGL6 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rc3h1Q4VGL6 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rc3h1Q4VGL6 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rc3h1Q4VGL6 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rc3h1Q4VGL6 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rc3h1Q4VGL6 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.68■□□□□ 0.74
Rc3h1Q4VGL6 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.68■□□□□ 0.74
Rc3h1Q4VGL6 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Rc3h1Q4VGL6 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rc3h1Q4VGL6 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Rc3h1Q4VGL6 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rc3h1Q4VGL6 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rc3h1Q4VGL6 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rc3h1Q4VGL6 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rc3h1Q4VGL6 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rc3h1Q4VGL6 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rc3h1Q4VGL6 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rc3h1Q4VGL6 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rc3h1Q4VGL6 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rc3h1Q4VGL6 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rc3h1Q4VGL6 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rc3h1Q4VGL6 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rc3h1Q4VGL6 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rc3h1Q4VGL6 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rc3h1Q4VGL6 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rc3h1Q4VGL6 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rc3h1Q4VGL6 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rc3h1Q4VGL6 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rc3h1Q4VGL6 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rc3h1Q4VGL6 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.67■□□□□ 0.74
Rc3h1Q4VGL6 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rc3h1Q4VGL6 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rc3h1Q4VGL6 Phf7-203ENSMUST00000226565 1971 ntBASIC19.66■□□□□ 0.74
Rc3h1Q4VGL6 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.66■□□□□ 0.74
Rc3h1Q4VGL6 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Rc3h1Q4VGL6 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rc3h1Q4VGL6 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rc3h1Q4VGL6 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.66■□□□□ 0.74
Rc3h1Q4VGL6 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Rc3h1Q4VGL6 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Rc3h1Q4VGL6 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rc3h1Q4VGL6 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.66■□□□□ 0.74
Rc3h1Q4VGL6 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Rc3h1Q4VGL6 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rc3h1Q4VGL6 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rc3h1Q4VGL6 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.66■□□□□ 0.74
Rc3h1Q4VGL6 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rc3h1Q4VGL6 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Rc3h1Q4VGL6 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Rc3h1Q4VGL6 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rc3h1Q4VGL6 Gm14859-201ENSMUST00000117752 357 ntBASIC19.65■□□□□ 0.74
Rc3h1Q4VGL6 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rc3h1Q4VGL6 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.65■□□□□ 0.74
Rc3h1Q4VGL6 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rc3h1Q4VGL6 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.65■□□□□ 0.74
Rc3h1Q4VGL6 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rc3h1Q4VGL6 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rc3h1Q4VGL6 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rc3h1Q4VGL6 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms