Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Gm37500-201ENSMUST00000192059 1443 ntBASIC29.74■■■□□ 2.35
Pds5bQ4VA53 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Pds5bQ4VA53 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Pds5bQ4VA53 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Pds5bQ4VA53 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
Pds5bQ4VA53 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Pds5bQ4VA53 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC29.73■■■□□ 2.35
Pds5bQ4VA53 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
Pds5bQ4VA53 Mir6956-201ENSMUST00000183598 62 ntBASIC29.73■■■□□ 2.35
Pds5bQ4VA53 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
Pds5bQ4VA53 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC29.73■■■□□ 2.35
Pds5bQ4VA53 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Pds5bQ4VA53 AC157650.3-201ENSMUST00000225058 1476 ntBASIC29.73■■■□□ 2.35
Pds5bQ4VA53 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Pds5bQ4VA53 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
Pds5bQ4VA53 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
Pds5bQ4VA53 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
Pds5bQ4VA53 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Pds5bQ4VA53 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Pds5bQ4VA53 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC29.72■■■□□ 2.35
Pds5bQ4VA53 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC29.72■■■□□ 2.35
Pds5bQ4VA53 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
Pds5bQ4VA53 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC29.72■■■□□ 2.35
Pds5bQ4VA53 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC29.72■■■□□ 2.35
Pds5bQ4VA53 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC29.72■■■□□ 2.35
Pds5bQ4VA53 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Pds5bQ4VA53 Gm37171-201ENSMUST00000192636 1185 ntBASIC29.71■■■□□ 2.35
Pds5bQ4VA53 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Pds5bQ4VA53 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Pds5bQ4VA53 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC29.71■■■□□ 2.35
Pds5bQ4VA53 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Pds5bQ4VA53 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Pds5bQ4VA53 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC29.71■■■□□ 2.35
Pds5bQ4VA53 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Pds5bQ4VA53 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC29.71■■■□□ 2.35
Pds5bQ4VA53 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Pds5bQ4VA53 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC29.71■■■□□ 2.35
Pds5bQ4VA53 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Pds5bQ4VA53 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Pds5bQ4VA53 AC174742.1-201ENSMUST00000218272 304 ntBASIC29.71■■■□□ 2.35
Pds5bQ4VA53 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Pds5bQ4VA53 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
Pds5bQ4VA53 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
Pds5bQ4VA53 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
Pds5bQ4VA53 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC29.7■■■□□ 2.34
Pds5bQ4VA53 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC29.7■■■□□ 2.34
Pds5bQ4VA53 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC29.7■■■□□ 2.34
Pds5bQ4VA53 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC29.7■■■□□ 2.34
Pds5bQ4VA53 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
Pds5bQ4VA53 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC29.7■■■□□ 2.34
Pds5bQ4VA53 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC29.7■■■□□ 2.34
Pds5bQ4VA53 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Pds5bQ4VA53 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Pds5bQ4VA53 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Pds5bQ4VA53 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC29.69■■■□□ 2.34
Pds5bQ4VA53 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Pds5bQ4VA53 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
Pds5bQ4VA53 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC29.69■■■□□ 2.34
Pds5bQ4VA53 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Pds5bQ4VA53 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC29.69■■■□□ 2.34
Pds5bQ4VA53 Gm3928-201ENSMUST00000121141 1307 ntBASIC29.69■■■□□ 2.34
Pds5bQ4VA53 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Pds5bQ4VA53 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Pds5bQ4VA53 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Pds5bQ4VA53 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC29.68■■■□□ 2.34
Pds5bQ4VA53 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC29.68■■■□□ 2.34
Pds5bQ4VA53 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC29.68■■■□□ 2.34
Pds5bQ4VA53 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC29.68■■■□□ 2.34
Pds5bQ4VA53 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Pds5bQ4VA53 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Pds5bQ4VA53 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC29.67■■■□□ 2.34
Pds5bQ4VA53 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC29.67■■■□□ 2.34
Pds5bQ4VA53 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC29.67■■■□□ 2.34
Pds5bQ4VA53 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC29.67■■■□□ 2.34
Pds5bQ4VA53 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Pds5bQ4VA53 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC29.67■■■□□ 2.34
Pds5bQ4VA53 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Pds5bQ4VA53 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
Pds5bQ4VA53 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC29.66■■■□□ 2.34
Pds5bQ4VA53 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC29.66■■■□□ 2.34
Pds5bQ4VA53 Gm4459-201ENSMUST00000118750 468 ntBASIC29.66■■■□□ 2.34
Pds5bQ4VA53 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Pds5bQ4VA53 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC29.66■■■□□ 2.34
Pds5bQ4VA53 Gm44945-201ENSMUST00000206764 1187 ntBASIC29.66■■■□□ 2.34
Pds5bQ4VA53 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Pds5bQ4VA53 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
Pds5bQ4VA53 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Pds5bQ4VA53 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Pds5bQ4VA53 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Pds5bQ4VA53 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC29.66■■■□□ 2.34
Pds5bQ4VA53 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC29.65■■■□□ 2.34
Pds5bQ4VA53 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
Pds5bQ4VA53 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC29.65■■■□□ 2.34
Pds5bQ4VA53 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC29.65■■■□□ 2.34
Pds5bQ4VA53 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Pds5bQ4VA53 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
Pds5bQ4VA53 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC29.65■■■□□ 2.34
Pds5bQ4VA53 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC29.65■■■□□ 2.34
Pds5bQ4VA53 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Pds5bQ4VA53 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC29.65■■■□□ 2.34
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms