Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ddx49Q4FZF3 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx49Q4FZF3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx49Q4FZF3 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.78■□□□□ 0.76
Ddx49Q4FZF3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx49Q4FZF3 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx49Q4FZF3 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx49Q4FZF3 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.78■□□□□ 0.76
Ddx49Q4FZF3 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Ddx49Q4FZF3 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx49Q4FZF3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx49Q4FZF3 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx49Q4FZF3 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.78■□□□□ 0.76
Ddx49Q4FZF3 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx49Q4FZF3 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ddx49Q4FZF3 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ddx49Q4FZF3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ddx49Q4FZF3 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ddx49Q4FZF3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ddx49Q4FZF3 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ddx49Q4FZF3 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.77■□□□□ 0.76
Ddx49Q4FZF3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ddx49Q4FZF3 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ddx49Q4FZF3 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.77■□□□□ 0.76
Ddx49Q4FZF3 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.77■□□□□ 0.76
Ddx49Q4FZF3 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ddx49Q4FZF3 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ddx49Q4FZF3 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Ddx49Q4FZF3 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ddx49Q4FZF3 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ddx49Q4FZF3 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx49Q4FZF3 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.76■□□□□ 0.75
Ddx49Q4FZF3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Ddx49Q4FZF3 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx49Q4FZF3 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx49Q4FZF3 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx49Q4FZF3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx49Q4FZF3 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx49Q4FZF3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Ddx49Q4FZF3 Gm11452-201ENSMUST00000122376 690 ntBASIC19.76■□□□□ 0.75
Ddx49Q4FZF3 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx49Q4FZF3 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx49Q4FZF3 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Ddx49Q4FZF3 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC19.76■□□□□ 0.75
Ddx49Q4FZF3 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC19.76■□□□□ 0.75
Ddx49Q4FZF3 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC19.76■□□□□ 0.75
Ddx49Q4FZF3 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.76■□□□□ 0.75
Ddx49Q4FZF3 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx49Q4FZF3 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx49Q4FZF3 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx49Q4FZF3 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx49Q4FZF3 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx49Q4FZF3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ddx49Q4FZF3 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx49Q4FZF3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx49Q4FZF3 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ddx49Q4FZF3 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.75■□□□□ 0.75
Ddx49Q4FZF3 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Ddx49Q4FZF3 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx49Q4FZF3 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx49Q4FZF3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx49Q4FZF3 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx49Q4FZF3 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx49Q4FZF3 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC19.75■□□□□ 0.75
Ddx49Q4FZF3 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Ddx49Q4FZF3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Ddx49Q4FZF3 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx49Q4FZF3 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx49Q4FZF3 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx49Q4FZF3 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Ddx49Q4FZF3 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC19.75■□□□□ 0.75
Ddx49Q4FZF3 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC19.75■□□□□ 0.75
Ddx49Q4FZF3 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Ddx49Q4FZF3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx49Q4FZF3 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ddx49Q4FZF3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Ddx49Q4FZF3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.75■□□□□ 0.75
Ddx49Q4FZF3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.75■□□□□ 0.75
Ddx49Q4FZF3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Ddx49Q4FZF3 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx49Q4FZF3 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx49Q4FZF3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx49Q4FZF3 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx49Q4FZF3 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx49Q4FZF3 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx49Q4FZF3 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx49Q4FZF3 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.74■□□□□ 0.75
Ddx49Q4FZF3 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx49Q4FZF3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC19.74■□□□□ 0.75
Ddx49Q4FZF3 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx49Q4FZF3 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.74■□□□□ 0.75
Ddx49Q4FZF3 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC19.74■□□□□ 0.75
Ddx49Q4FZF3 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx49Q4FZF3 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.74■□□□□ 0.75
Ddx49Q4FZF3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx49Q4FZF3 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Ddx49Q4FZF3 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx49Q4FZF3 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx49Q4FZF3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ddx49Q4FZF3 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms