Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Prpf38aQ4FK66 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf38aQ4FK66 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf38aQ4FK66 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf38aQ4FK66 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.89■□□□□ 0.78
Prpf38aQ4FK66 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Prpf38aQ4FK66 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Prpf38aQ4FK66 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.89■□□□□ 0.77
Prpf38aQ4FK66 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.89■□□□□ 0.77
Prpf38aQ4FK66 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.89■□□□□ 0.77
Prpf38aQ4FK66 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.89■□□□□ 0.77
Prpf38aQ4FK66 Ank2-226ENSMUST00000189368 339 ntBASIC19.89■□□□□ 0.77
Prpf38aQ4FK66 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.89■□□□□ 0.77
Prpf38aQ4FK66 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Prpf38aQ4FK66 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Prpf38aQ4FK66 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.89■□□□□ 0.77
Prpf38aQ4FK66 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Prpf38aQ4FK66 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Prpf38aQ4FK66 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Prpf38aQ4FK66 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Prpf38aQ4FK66 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Prpf38aQ4FK66 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Prpf38aQ4FK66 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Prpf38aQ4FK66 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Prpf38aQ4FK66 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf38aQ4FK66 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.88■□□□□ 0.77
Prpf38aQ4FK66 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf38aQ4FK66 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf38aQ4FK66 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf38aQ4FK66 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf38aQ4FK66 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf38aQ4FK66 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.88■□□□□ 0.77
Prpf38aQ4FK66 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf38aQ4FK66 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
Prpf38aQ4FK66 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Prpf38aQ4FK66 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf38aQ4FK66 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf38aQ4FK66 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Prpf38aQ4FK66 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf38aQ4FK66 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.88■□□□□ 0.77
Prpf38aQ4FK66 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prpf38aQ4FK66 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf38aQ4FK66 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf38aQ4FK66 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.87■□□□□ 0.77
Prpf38aQ4FK66 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf38aQ4FK66 Mir770-201ENSMUST00000103252 94 ntBASIC19.87■□□□□ 0.77
Prpf38aQ4FK66 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Prpf38aQ4FK66 Gm11950-201ENSMUST00000121615 838 ntBASIC19.87■□□□□ 0.77
Prpf38aQ4FK66 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf38aQ4FK66 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Prpf38aQ4FK66 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Prpf38aQ4FK66 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf38aQ4FK66 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Prpf38aQ4FK66 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.87■□□□□ 0.77
Prpf38aQ4FK66 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.87■□□□□ 0.77
Prpf38aQ4FK66 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.87■□□□□ 0.77
Prpf38aQ4FK66 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf38aQ4FK66 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prpf38aQ4FK66 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf38aQ4FK66 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf38aQ4FK66 Gm13186-201ENSMUST00000118031 316 ntBASIC19.86■□□□□ 0.77
Prpf38aQ4FK66 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf38aQ4FK66 Gm6623-201ENSMUST00000173570 544 ntBASIC19.86■□□□□ 0.77
Prpf38aQ4FK66 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
Prpf38aQ4FK66 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf38aQ4FK66 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf38aQ4FK66 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf38aQ4FK66 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf38aQ4FK66 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Prpf38aQ4FK66 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf38aQ4FK66 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf38aQ4FK66 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf38aQ4FK66 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.86■□□□□ 0.77
Prpf38aQ4FK66 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
Prpf38aQ4FK66 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf38aQ4FK66 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prpf38aQ4FK66 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf38aQ4FK66 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf38aQ4FK66 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf38aQ4FK66 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf38aQ4FK66 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf38aQ4FK66 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf38aQ4FK66 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf38aQ4FK66 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf38aQ4FK66 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf38aQ4FK66 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf38aQ4FK66 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf38aQ4FK66 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.85■□□□□ 0.77
Prpf38aQ4FK66 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.85■□□□□ 0.77
Prpf38aQ4FK66 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf38aQ4FK66 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf38aQ4FK66 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf38aQ4FK66 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf38aQ4FK66 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf38aQ4FK66 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf38aQ4FK66 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.85■□□□□ 0.77
Prpf38aQ4FK66 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Prpf38aQ4FK66 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf38aQ4FK66 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Prpf38aQ4FK66 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms