Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cks1brtQ3UNC9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC12.37□□□□□ -0.43
Cks1brtQ3UNC9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC12.37□□□□□ -0.43
Cks1brtQ3UNC9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cks1brtQ3UNC9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cks1brtQ3UNC9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cks1brtQ3UNC9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Cks1brtQ3UNC9 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cks1brtQ3UNC9 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC12.37□□□□□ -0.43
Cks1brtQ3UNC9 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cks1brtQ3UNC9 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cks1brtQ3UNC9 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.37□□□□□ -0.43
Cks1brtQ3UNC9 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cks1brtQ3UNC9 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cks1brtQ3UNC9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cks1brtQ3UNC9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cks1brtQ3UNC9 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Cks1brtQ3UNC9 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cks1brtQ3UNC9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cks1brtQ3UNC9 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cks1brtQ3UNC9 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cks1brtQ3UNC9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cks1brtQ3UNC9 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cks1brtQ3UNC9 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Cks1brtQ3UNC9 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cks1brtQ3UNC9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cks1brtQ3UNC9 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cks1brtQ3UNC9 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cks1brtQ3UNC9 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cks1brtQ3UNC9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cks1brtQ3UNC9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC12.36□□□□□ -0.43
Cks1brtQ3UNC9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC12.36□□□□□ -0.43
Cks1brtQ3UNC9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cks1brtQ3UNC9 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cks1brtQ3UNC9 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Cks1brtQ3UNC9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cks1brtQ3UNC9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cks1brtQ3UNC9 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Cks1brtQ3UNC9 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC12.36□□□□□ -0.43
Cks1brtQ3UNC9 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cks1brtQ3UNC9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC12.36□□□□□ -0.43
Cks1brtQ3UNC9 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cks1brtQ3UNC9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cks1brtQ3UNC9 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cks1brtQ3UNC9 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cks1brtQ3UNC9 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Cks1brtQ3UNC9 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Cks1brtQ3UNC9 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cks1brtQ3UNC9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cks1brtQ3UNC9 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cks1brtQ3UNC9 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cks1brtQ3UNC9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC12.35□□□□□ -0.43
Cks1brtQ3UNC9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC12.35□□□□□ -0.43
Cks1brtQ3UNC9 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
Cks1brtQ3UNC9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cks1brtQ3UNC9 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cks1brtQ3UNC9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cks1brtQ3UNC9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cks1brtQ3UNC9 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.35□□□□□ -0.43
Cks1brtQ3UNC9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cks1brtQ3UNC9 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cks1brtQ3UNC9 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cks1brtQ3UNC9 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Cks1brtQ3UNC9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Cks1brtQ3UNC9 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cks1brtQ3UNC9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cks1brtQ3UNC9 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cks1brtQ3UNC9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Cks1brtQ3UNC9 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cks1brtQ3UNC9 AC069562.2-201ENSMUST00000224644 2146 ntBASIC12.35□□□□□ -0.43
Cks1brtQ3UNC9 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cks1brtQ3UNC9 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cks1brtQ3UNC9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC12.35□□□□□ -0.43
Cks1brtQ3UNC9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC12.34□□□□□ -0.43
Cks1brtQ3UNC9 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cks1brtQ3UNC9 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cks1brtQ3UNC9 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Cks1brtQ3UNC9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cks1brtQ3UNC9 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cks1brtQ3UNC9 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cks1brtQ3UNC9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Cks1brtQ3UNC9 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cks1brtQ3UNC9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cks1brtQ3UNC9 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cks1brtQ3UNC9 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cks1brtQ3UNC9 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cks1brtQ3UNC9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cks1brtQ3UNC9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cks1brtQ3UNC9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cks1brtQ3UNC9 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cks1brtQ3UNC9 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cks1brtQ3UNC9 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cks1brtQ3UNC9 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cks1brtQ3UNC9 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Cks1brtQ3UNC9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.43
Cks1brtQ3UNC9 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cks1brtQ3UNC9 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cks1brtQ3UNC9 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cks1brtQ3UNC9 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Cks1brtQ3UNC9 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms