Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.14■□□□□ 0.33
Usp30Q3UN04 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp30Q3UN04 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp30Q3UN04 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp30Q3UN04 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp30Q3UN04 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp30Q3UN04 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp30Q3UN04 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Usp30Q3UN04 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Usp30Q3UN04 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp30Q3UN04 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp30Q3UN04 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Usp30Q3UN04 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Usp30Q3UN04 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp30Q3UN04 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usp30Q3UN04 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp30Q3UN04 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp30Q3UN04 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Usp30Q3UN04 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp30Q3UN04 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Usp30Q3UN04 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp30Q3UN04 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usp30Q3UN04 Gm45328-201ENSMUST00000210942 917 ntBASIC17.13■□□□□ 0.33
Usp30Q3UN04 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp30Q3UN04 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp30Q3UN04 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp30Q3UN04 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp30Q3UN04 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usp30Q3UN04 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp30Q3UN04 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp30Q3UN04 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Usp30Q3UN04 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp30Q3UN04 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Usp30Q3UN04 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp30Q3UN04 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp30Q3UN04 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp30Q3UN04 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp30Q3UN04 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp30Q3UN04 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp30Q3UN04 Gm27000-201ENSMUST00000182943 842 ntBASIC17.12■□□□□ 0.33
Usp30Q3UN04 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp30Q3UN04 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Usp30Q3UN04 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp30Q3UN04 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.12■□□□□ 0.33
Usp30Q3UN04 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.12■□□□□ 0.33
Usp30Q3UN04 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Usp30Q3UN04 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Usp30Q3UN04 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp30Q3UN04 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp30Q3UN04 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp30Q3UN04 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp30Q3UN04 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.11■□□□□ 0.33
Usp30Q3UN04 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp30Q3UN04 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp30Q3UN04 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp30Q3UN04 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp30Q3UN04 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp30Q3UN04 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Usp30Q3UN04 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Usp30Q3UN04 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp30Q3UN04 Gm27357-201ENSMUST00000183754 135 ntBASIC17.11■□□□□ 0.33
Usp30Q3UN04 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.11■□□□□ 0.33
Usp30Q3UN04 Gm18669-201ENSMUST00000216049 778 ntBASIC17.11■□□□□ 0.33
Usp30Q3UN04 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp30Q3UN04 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Usp30Q3UN04 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp30Q3UN04 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp30Q3UN04 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp30Q3UN04 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.11■□□□□ 0.33
Usp30Q3UN04 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp30Q3UN04 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp30Q3UN04 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.1■□□□□ 0.33
Usp30Q3UN04 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp30Q3UN04 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp30Q3UN04 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.1■□□□□ 0.33
Usp30Q3UN04 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp30Q3UN04 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Usp30Q3UN04 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp30Q3UN04 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usp30Q3UN04 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usp30Q3UN04 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.1■□□□□ 0.33
Usp30Q3UN04 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Usp30Q3UN04 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp30Q3UN04 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Usp30Q3UN04 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp30Q3UN04 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usp30Q3UN04 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usp30Q3UN04 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usp30Q3UN04 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp30Q3UN04 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp30Q3UN04 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp30Q3UN04 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Usp30Q3UN04 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Usp30Q3UN04 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.09■□□□□ 0.33
Usp30Q3UN04 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp30Q3UN04 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usp30Q3UN04 Gm28033-201ENSMUST00000184224 96 ntBASIC17.09■□□□□ 0.33
Usp30Q3UN04 Gm27742-201ENSMUST00000184667 60 ntBASIC17.09■□□□□ 0.33
Usp30Q3UN04 Gm17971-201ENSMUST00000190239 806 ntBASIC17.09■□□□□ 0.33
Usp30Q3UN04 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms