Protein–RNA interactions for Protein: Q3ULF4

Spg7, Paraplegin, mousemouse

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg7Q3ULF4 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Spg7Q3ULF4 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Spg7Q3ULF4 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Spg7Q3ULF4 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Spg7Q3ULF4 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Spg7Q3ULF4 Gm13186-201ENSMUST00000118031 316 ntBASIC20.32■□□□□ 0.84
Spg7Q3ULF4 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC20.32■□□□□ 0.84
Spg7Q3ULF4 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Spg7Q3ULF4 Gm28033-201ENSMUST00000184224 96 ntBASIC20.32■□□□□ 0.84
Spg7Q3ULF4 Gm8969-201ENSMUST00000199694 526 ntBASIC20.32■□□□□ 0.84
Spg7Q3ULF4 Otx2os1-206ENSMUST00000228153 787 ntBASIC20.32■□□□□ 0.84
Spg7Q3ULF4 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Spg7Q3ULF4 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Spg7Q3ULF4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Spg7Q3ULF4 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Spg7Q3ULF4 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Spg7Q3ULF4 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Spg7Q3ULF4 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Spg7Q3ULF4 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Spg7Q3ULF4 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Spg7Q3ULF4 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Spg7Q3ULF4 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Spg7Q3ULF4 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Spg7Q3ULF4 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Spg7Q3ULF4 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Spg7Q3ULF4 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Spg7Q3ULF4 Ighv6-1-201ENSMUST00000193612 343 ntBASIC20.31■□□□□ 0.84
Spg7Q3ULF4 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Spg7Q3ULF4 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Spg7Q3ULF4 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Spg7Q3ULF4 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Spg7Q3ULF4 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Spg7Q3ULF4 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Spg7Q3ULF4 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Spg7Q3ULF4 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Spg7Q3ULF4 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Spg7Q3ULF4 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Spg7Q3ULF4 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Spg7Q3ULF4 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Spg7Q3ULF4 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Spg7Q3ULF4 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Spg7Q3ULF4 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Spg7Q3ULF4 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Spg7Q3ULF4 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Spg7Q3ULF4 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Spg7Q3ULF4 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Spg7Q3ULF4 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.29■□□□□ 0.84
Spg7Q3ULF4 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Spg7Q3ULF4 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Spg7Q3ULF4 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Spg7Q3ULF4 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC20.29■□□□□ 0.84
Spg7Q3ULF4 Mir3081-201ENSMUST00000175305 84 ntBASIC20.29■□□□□ 0.84
Spg7Q3ULF4 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Spg7Q3ULF4 Gm27357-201ENSMUST00000183754 135 ntBASIC20.29■□□□□ 0.84
Spg7Q3ULF4 Gm17971-201ENSMUST00000190239 806 ntBASIC20.29■□□□□ 0.84
Spg7Q3ULF4 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Spg7Q3ULF4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Spg7Q3ULF4 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Spg7Q3ULF4 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Spg7Q3ULF4 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.28■□□□□ 0.84
Spg7Q3ULF4 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.28■□□□□ 0.84
Spg7Q3ULF4 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Spg7Q3ULF4 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Spg7Q3ULF4 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Spg7Q3ULF4 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Spg7Q3ULF4 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Spg7Q3ULF4 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Spg7Q3ULF4 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Spg7Q3ULF4 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC20.28■□□□□ 0.84
Spg7Q3ULF4 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.28■□□□□ 0.84
Spg7Q3ULF4 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Spg7Q3ULF4 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Spg7Q3ULF4 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.28■□□□□ 0.84
Spg7Q3ULF4 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Spg7Q3ULF4 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Spg7Q3ULF4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Spg7Q3ULF4 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Spg7Q3ULF4 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Spg7Q3ULF4 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Spg7Q3ULF4 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Spg7Q3ULF4 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Spg7Q3ULF4 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Spg7Q3ULF4 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC20.27■□□□□ 0.84
Spg7Q3ULF4 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
Spg7Q3ULF4 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Spg7Q3ULF4 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Spg7Q3ULF4 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Spg7Q3ULF4 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Spg7Q3ULF4 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Spg7Q3ULF4 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Spg7Q3ULF4 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Spg7Q3ULF4 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Spg7Q3ULF4 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.26■□□□□ 0.83
Spg7Q3ULF4 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Spg7Q3ULF4 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Spg7Q3ULF4 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Spg7Q3ULF4 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Spg7Q3ULF4 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Spg7Q3ULF4 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Spg7Q3ULF4 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms