Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.93■□□□□ 0.46
Cul4aQ3TCH7 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.93■□□□□ 0.46
Cul4aQ3TCH7 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cul4aQ3TCH7 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cul4aQ3TCH7 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Cul4aQ3TCH7 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Cul4aQ3TCH7 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Cul4aQ3TCH7 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cul4aQ3TCH7 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cul4aQ3TCH7 Gm12382-201ENSMUST00000122005 922 ntBASIC17.93■□□□□ 0.46
Cul4aQ3TCH7 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.93■□□□□ 0.46
Cul4aQ3TCH7 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cul4aQ3TCH7 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cul4aQ3TCH7 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Cul4aQ3TCH7 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cul4aQ3TCH7 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.93■□□□□ 0.46
Cul4aQ3TCH7 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cul4aQ3TCH7 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cul4aQ3TCH7 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cul4aQ3TCH7 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Cul4aQ3TCH7 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cul4aQ3TCH7 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Cul4aQ3TCH7 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cul4aQ3TCH7 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cul4aQ3TCH7 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cul4aQ3TCH7 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cul4aQ3TCH7 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cul4aQ3TCH7 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.92■□□□□ 0.46
Cul4aQ3TCH7 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.92■□□□□ 0.46
Cul4aQ3TCH7 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cul4aQ3TCH7 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cul4aQ3TCH7 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cul4aQ3TCH7 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cul4aQ3TCH7 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cul4aQ3TCH7 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cul4aQ3TCH7 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cul4aQ3TCH7 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cul4aQ3TCH7 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cul4aQ3TCH7 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Cul4aQ3TCH7 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cul4aQ3TCH7 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.91■□□□□ 0.46
Cul4aQ3TCH7 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cul4aQ3TCH7 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cul4aQ3TCH7 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cul4aQ3TCH7 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cul4aQ3TCH7 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cul4aQ3TCH7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.91■□□□□ 0.46
Cul4aQ3TCH7 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Cul4aQ3TCH7 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Cul4aQ3TCH7 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cul4aQ3TCH7 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.91■□□□□ 0.46
Cul4aQ3TCH7 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cul4aQ3TCH7 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cul4aQ3TCH7 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cul4aQ3TCH7 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cul4aQ3TCH7 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cul4aQ3TCH7 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cul4aQ3TCH7 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cul4aQ3TCH7 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cul4aQ3TCH7 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Cul4aQ3TCH7 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cul4aQ3TCH7 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cul4aQ3TCH7 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cul4aQ3TCH7 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Cul4aQ3TCH7 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.9■□□□□ 0.46
Cul4aQ3TCH7 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cul4aQ3TCH7 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Cul4aQ3TCH7 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cul4aQ3TCH7 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.9■□□□□ 0.46
Cul4aQ3TCH7 Gm17661-201ENSMUST00000170317 270 ntBASIC17.9■□□□□ 0.46
Cul4aQ3TCH7 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.9■□□□□ 0.46
Cul4aQ3TCH7 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.9■□□□□ 0.46
Cul4aQ3TCH7 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Cul4aQ3TCH7 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cul4aQ3TCH7 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cul4aQ3TCH7 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cul4aQ3TCH7 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Cul4aQ3TCH7 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cul4aQ3TCH7 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Cul4aQ3TCH7 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cul4aQ3TCH7 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Cul4aQ3TCH7 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Cul4aQ3TCH7 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Cul4aQ3TCH7 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Cul4aQ3TCH7 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Cul4aQ3TCH7 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cul4aQ3TCH7 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cul4aQ3TCH7 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Cul4aQ3TCH7 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cul4aQ3TCH7 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.89■□□□□ 0.45
Cul4aQ3TCH7 Gm18666-201ENSMUST00000190039 958 ntBASIC17.89■□□□□ 0.45
Cul4aQ3TCH7 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cul4aQ3TCH7 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Cul4aQ3TCH7 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cul4aQ3TCH7 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Cul4aQ3TCH7 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cul4aQ3TCH7 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Cul4aQ3TCH7 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cul4aQ3TCH7 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.89■□□□□ 0.45
Cul4aQ3TCH7 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms