Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nhej1Q3KNJ2 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nhej1Q3KNJ2 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Nhej1Q3KNJ2 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nhej1Q3KNJ2 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nhej1Q3KNJ2 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Nhej1Q3KNJ2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Nhej1Q3KNJ2 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nhej1Q3KNJ2 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nhej1Q3KNJ2 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nhej1Q3KNJ2 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.19■□□□□ 0.5
Nhej1Q3KNJ2 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.19■□□□□ 0.5
Nhej1Q3KNJ2 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nhej1Q3KNJ2 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nhej1Q3KNJ2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nhej1Q3KNJ2 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nhej1Q3KNJ2 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Nhej1Q3KNJ2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nhej1Q3KNJ2 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nhej1Q3KNJ2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Nhej1Q3KNJ2 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nhej1Q3KNJ2 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nhej1Q3KNJ2 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nhej1Q3KNJ2 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nhej1Q3KNJ2 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nhej1Q3KNJ2 Gm13158-201ENSMUST00000122007 736 ntBASIC18.18■□□□□ 0.5
Nhej1Q3KNJ2 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nhej1Q3KNJ2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nhej1Q3KNJ2 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nhej1Q3KNJ2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nhej1Q3KNJ2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nhej1Q3KNJ2 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nhej1Q3KNJ2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nhej1Q3KNJ2 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nhej1Q3KNJ2 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nhej1Q3KNJ2 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nhej1Q3KNJ2 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nhej1Q3KNJ2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Nhej1Q3KNJ2 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nhej1Q3KNJ2 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nhej1Q3KNJ2 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nhej1Q3KNJ2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Nhej1Q3KNJ2 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Nhej1Q3KNJ2 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nhej1Q3KNJ2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nhej1Q3KNJ2 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nhej1Q3KNJ2 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nhej1Q3KNJ2 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Nhej1Q3KNJ2 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Nhej1Q3KNJ2 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nhej1Q3KNJ2 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nhej1Q3KNJ2 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nhej1Q3KNJ2 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Nhej1Q3KNJ2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nhej1Q3KNJ2 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nhej1Q3KNJ2 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nhej1Q3KNJ2 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nhej1Q3KNJ2 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nhej1Q3KNJ2 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Nhej1Q3KNJ2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.16■□□□□ 0.5
Nhej1Q3KNJ2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nhej1Q3KNJ2 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nhej1Q3KNJ2 Gm18025-201ENSMUST00000221733 862 ntBASIC18.16■□□□□ 0.5
Nhej1Q3KNJ2 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nhej1Q3KNJ2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nhej1Q3KNJ2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
Nhej1Q3KNJ2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nhej1Q3KNJ2 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nhej1Q3KNJ2 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nhej1Q3KNJ2 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.16■□□□□ 0.5
Nhej1Q3KNJ2 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nhej1Q3KNJ2 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nhej1Q3KNJ2 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nhej1Q3KNJ2 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.16■□□□□ 0.5
Nhej1Q3KNJ2 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nhej1Q3KNJ2 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Nhej1Q3KNJ2 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nhej1Q3KNJ2 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nhej1Q3KNJ2 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nhej1Q3KNJ2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nhej1Q3KNJ2 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Nhej1Q3KNJ2 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Nhej1Q3KNJ2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.15■□□□□ 0.5
Nhej1Q3KNJ2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Nhej1Q3KNJ2 Gm4974-201ENSMUST00000209974 875 ntBASIC18.15■□□□□ 0.5
Nhej1Q3KNJ2 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nhej1Q3KNJ2 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Nhej1Q3KNJ2 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nhej1Q3KNJ2 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Nhej1Q3KNJ2 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Nhej1Q3KNJ2 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Nhej1Q3KNJ2 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.14■□□□□ 0.5
Nhej1Q3KNJ2 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nhej1Q3KNJ2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nhej1Q3KNJ2 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.14■□□□□ 0.49
Nhej1Q3KNJ2 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Nhej1Q3KNJ2 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nhej1Q3KNJ2 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nhej1Q3KNJ2 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nhej1Q3KNJ2 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms