Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ush2AQ2QI47 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Ush2AQ2QI47 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC9.12□□□□□ -0.95
Ush2AQ2QI47 Gm25745-201ENSMUST00000174945 133 ntBASIC9.12□□□□□ -0.95
Ush2AQ2QI47 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Ush2AQ2QI47 Gm7506-201ENSMUST00000207758 815 ntBASIC9.12□□□□□ -0.95
Ush2AQ2QI47 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC9.11□□□□□ -0.95
Ush2AQ2QI47 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ush2AQ2QI47 AC155252.2-201ENSMUST00000226946 680 ntBASIC9.11□□□□□ -0.95
Ush2AQ2QI47 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ush2AQ2QI47 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ush2AQ2QI47 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC9.11□□□□□ -0.95
Ush2AQ2QI47 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ush2AQ2QI47 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ush2AQ2QI47 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC9.11□□□□□ -0.95
Ush2AQ2QI47 Gm13829-201ENSMUST00000119600 138 ntBASIC9.11□□□□□ -0.95
Ush2AQ2QI47 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ush2AQ2QI47 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC9.11□□□□□ -0.95
Ush2AQ2QI47 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Ush2AQ2QI47 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ush2AQ2QI47 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ush2AQ2QI47 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ush2AQ2QI47 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ush2AQ2QI47 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ush2AQ2QI47 Gm15853-202ENSMUST00000195518 2041 ntBASIC9.11□□□□□ -0.95
Ush2AQ2QI47 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC9.11□□□□□ -0.95
Ush2AQ2QI47 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC9.11□□□□□ -0.95
Ush2AQ2QI47 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Ush2AQ2QI47 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Ush2AQ2QI47 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Ush2AQ2QI47 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ush2AQ2QI47 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ush2AQ2QI47 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ush2AQ2QI47 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ush2AQ2QI47 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC9.11□□□□□ -0.95
Ush2AQ2QI47 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
Ush2AQ2QI47 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ush2AQ2QI47 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ush2AQ2QI47 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ush2AQ2QI47 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ush2AQ2QI47 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ush2AQ2QI47 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ush2AQ2QI47 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ush2AQ2QI47 Gm17968-201ENSMUST00000194902 784 ntBASIC9.1□□□□□ -0.95
Ush2AQ2QI47 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ush2AQ2QI47 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
Ush2AQ2QI47 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ush2AQ2QI47 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ush2AQ2QI47 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Ush2AQ2QI47 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Ush2AQ2QI47 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ush2AQ2QI47 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ush2AQ2QI47 Gm18889-201ENSMUST00000174284 929 ntBASIC9.1□□□□□ -0.95
Ush2AQ2QI47 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC9.1□□□□□ -0.95
Ush2AQ2QI47 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC9.1□□□□□ -0.95
Ush2AQ2QI47 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ush2AQ2QI47 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ush2AQ2QI47 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ush2AQ2QI47 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Ush2AQ2QI47 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC9.1□□□□□ -0.95
Ush2AQ2QI47 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Ush2AQ2QI47 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
Ush2AQ2QI47 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ush2AQ2QI47 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Ush2AQ2QI47 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Ush2AQ2QI47 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Ush2AQ2QI47 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC9.1□□□□□ -0.95
Ush2AQ2QI47 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Ush2AQ2QI47 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ush2AQ2QI47 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Ush2AQ2QI47 AC127302.2-201ENSMUST00000215212 268 ntBASIC9.1□□□□□ -0.95
Ush2AQ2QI47 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ush2AQ2QI47 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ush2AQ2QI47 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ush2AQ2QI47 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ush2AQ2QI47 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ush2AQ2QI47 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ush2AQ2QI47 Gm13365-201ENSMUST00000121188 973 ntBASIC9.09□□□□□ -0.95
Ush2AQ2QI47 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Ush2AQ2QI47 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
Ush2AQ2QI47 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ush2AQ2QI47 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ush2AQ2QI47 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ush2AQ2QI47 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Ush2AQ2QI47 Gm6277-202ENSMUST00000224036 2779 ntBASIC9.09□□□□□ -0.95
Ush2AQ2QI47 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ush2AQ2QI47 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ush2AQ2QI47 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ush2AQ2QI47 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC9.09□□□□□ -0.95
Ush2AQ2QI47 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC9.09□□□□□ -0.95
Ush2AQ2QI47 Nrn1-204ENSMUST00000224323 1779 ntBASIC9.09□□□□□ -0.95
Ush2AQ2QI47 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Ush2AQ2QI47 Phf7-203ENSMUST00000226565 1971 ntBASIC9.09□□□□□ -0.95
Ush2AQ2QI47 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ush2AQ2QI47 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Ush2AQ2QI47 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC9.09□□□□□ -0.95
Ush2AQ2QI47 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ush2AQ2QI47 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Ush2AQ2QI47 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ush2AQ2QI47 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms