Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chrna5Q2MKA5 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Chrna5Q2MKA5 Gm27867-201ENSMUST00000184778 125 ntBASIC20.28■□□□□ 0.84
Chrna5Q2MKA5 Gm37935-201ENSMUST00000192012 982 ntBASIC20.28■□□□□ 0.84
Chrna5Q2MKA5 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chrna5Q2MKA5 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chrna5Q2MKA5 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chrna5Q2MKA5 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chrna5Q2MKA5 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chrna5Q2MKA5 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chrna5Q2MKA5 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Chrna5Q2MKA5 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chrna5Q2MKA5 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chrna5Q2MKA5 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Chrna5Q2MKA5 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chrna5Q2MKA5 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.27■□□□□ 0.84
Chrna5Q2MKA5 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chrna5Q2MKA5 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chrna5Q2MKA5 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chrna5Q2MKA5 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC20.27■□□□□ 0.84
Chrna5Q2MKA5 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Chrna5Q2MKA5 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC20.27■□□□□ 0.84
Chrna5Q2MKA5 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Chrna5Q2MKA5 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chrna5Q2MKA5 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC20.27■□□□□ 0.84
Chrna5Q2MKA5 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Chrna5Q2MKA5 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC20.27■□□□□ 0.84
Chrna5Q2MKA5 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC20.27■□□□□ 0.84
Chrna5Q2MKA5 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Chrna5Q2MKA5 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Chrna5Q2MKA5 Rps4l-201ENSMUST00000071745 943 ntBASIC20.27■□□□□ 0.84
Chrna5Q2MKA5 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chrna5Q2MKA5 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC20.27■□□□□ 0.84
Chrna5Q2MKA5 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Chrna5Q2MKA5 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Chrna5Q2MKA5 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Chrna5Q2MKA5 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Chrna5Q2MKA5 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.83
Chrna5Q2MKA5 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chrna5Q2MKA5 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chrna5Q2MKA5 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.26■□□□□ 0.83
Chrna5Q2MKA5 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chrna5Q2MKA5 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Chrna5Q2MKA5 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Chrna5Q2MKA5 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Chrna5Q2MKA5 Gm44357-201ENSMUST00000195897 142 ntBASIC20.26■□□□□ 0.83
Chrna5Q2MKA5 Gm19658-201ENSMUST00000196231 138 ntBASIC20.26■□□□□ 0.83
Chrna5Q2MKA5 Gm44367-201ENSMUST00000196836 138 ntBASIC20.26■□□□□ 0.83
Chrna5Q2MKA5 Gm44350-201ENSMUST00000197197 138 ntBASIC20.26■□□□□ 0.83
Chrna5Q2MKA5 Gm44390-201ENSMUST00000197533 144 ntBASIC20.26■□□□□ 0.83
Chrna5Q2MKA5 Gm44313-201ENSMUST00000198018 138 ntBASIC20.26■□□□□ 0.83
Chrna5Q2MKA5 Gm44486-201ENSMUST00000198508 138 ntBASIC20.26■□□□□ 0.83
Chrna5Q2MKA5 Gm44454-201ENSMUST00000198541 138 ntBASIC20.26■□□□□ 0.83
Chrna5Q2MKA5 Gm44314-201ENSMUST00000199263 138 ntBASIC20.26■□□□□ 0.83
Chrna5Q2MKA5 Gm44394-201ENSMUST00000199558 138 ntBASIC20.26■□□□□ 0.83
Chrna5Q2MKA5 Gm44484-201ENSMUST00000199873 138 ntBASIC20.26■□□□□ 0.83
Chrna5Q2MKA5 Gm44466-201ENSMUST00000200264 138 ntBASIC20.26■□□□□ 0.83
Chrna5Q2MKA5 Gm44359-201ENSMUST00000200671 138 ntBASIC20.26■□□□□ 0.83
Chrna5Q2MKA5 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Chrna5Q2MKA5 AC138767.1-201ENSMUST00000222661 415 ntBASIC20.26■□□□□ 0.83
Chrna5Q2MKA5 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chrna5Q2MKA5 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chrna5Q2MKA5 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chrna5Q2MKA5 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Chrna5Q2MKA5 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chrna5Q2MKA5 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Chrna5Q2MKA5 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chrna5Q2MKA5 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC20.26■□□□□ 0.83
Chrna5Q2MKA5 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chrna5Q2MKA5 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Chrna5Q2MKA5 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC20.25■□□□□ 0.83
Chrna5Q2MKA5 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Chrna5Q2MKA5 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chrna5Q2MKA5 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Chrna5Q2MKA5 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Chrna5Q2MKA5 Mir5131-201ENSMUST00000175426 93 ntBASIC20.25■□□□□ 0.83
Chrna5Q2MKA5 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC20.25■□□□□ 0.83
Chrna5Q2MKA5 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chrna5Q2MKA5 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chrna5Q2MKA5 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Chrna5Q2MKA5 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chrna5Q2MKA5 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chrna5Q2MKA5 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chrna5Q2MKA5 Gm6190-201ENSMUST00000220683 1374 ntBASIC20.24■□□□□ 0.83
Chrna5Q2MKA5 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Chrna5Q2MKA5 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Chrna5Q2MKA5 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC20.24■□□□□ 0.83
Chrna5Q2MKA5 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chrna5Q2MKA5 Gm18421-201ENSMUST00000204122 625 ntBASIC20.24■□□□□ 0.83
Chrna5Q2MKA5 Vti1a-206ENSMUST00000225529 1244 ntBASIC20.24■□□□□ 0.83
Chrna5Q2MKA5 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chrna5Q2MKA5 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chrna5Q2MKA5 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Chrna5Q2MKA5 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC20.24■□□□□ 0.83
Chrna5Q2MKA5 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Chrna5Q2MKA5 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Chrna5Q2MKA5 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chrna5Q2MKA5 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chrna5Q2MKA5 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chrna5Q2MKA5 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms