Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm17271-201ENSMUST00000165535 355 ntBASIC15.28■□□□□ 0.04
Chd8Q09XV5 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd8Q09XV5 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd8Q09XV5 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd8Q09XV5 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd8Q09XV5 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd8Q09XV5 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd8Q09XV5 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd8Q09XV5 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.28■□□□□ 0.04
Chd8Q09XV5 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chd8Q09XV5 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.28■□□□□ 0.04
Chd8Q09XV5 Gm22175-201ENSMUST00000175007 78 ntBASIC15.28■□□□□ 0.04
Chd8Q09XV5 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chd8Q09XV5 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chd8Q09XV5 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chd8Q09XV5 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chd8Q09XV5 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.27■□□□□ 0.04
Chd8Q09XV5 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.27■□□□□ 0.04
Chd8Q09XV5 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chd8Q09XV5 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chd8Q09XV5 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chd8Q09XV5 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Chd8Q09XV5 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Chd8Q09XV5 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chd8Q09XV5 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chd8Q09XV5 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Chd8Q09XV5 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Chd8Q09XV5 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.03
Chd8Q09XV5 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chd8Q09XV5 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Chd8Q09XV5 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chd8Q09XV5 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chd8Q09XV5 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chd8Q09XV5 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chd8Q09XV5 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Chd8Q09XV5 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Chd8Q09XV5 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chd8Q09XV5 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chd8Q09XV5 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chd8Q09XV5 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chd8Q09XV5 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chd8Q09XV5 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chd8Q09XV5 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.26■□□□□ 0.03
Chd8Q09XV5 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chd8Q09XV5 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Chd8Q09XV5 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chd8Q09XV5 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chd8Q09XV5 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chd8Q09XV5 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Chd8Q09XV5 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chd8Q09XV5 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Chd8Q09XV5 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chd8Q09XV5 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chd8Q09XV5 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Chd8Q09XV5 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.25■□□□□ 0.03
Chd8Q09XV5 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Chd8Q09XV5 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.25■□□□□ 0.03
Chd8Q09XV5 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.25■□□□□ 0.03
Chd8Q09XV5 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chd8Q09XV5 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Chd8Q09XV5 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chd8Q09XV5 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Chd8Q09XV5 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chd8Q09XV5 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC15.25■□□□□ 0.03
Chd8Q09XV5 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.25■□□□□ 0.03
Chd8Q09XV5 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.25■□□□□ 0.03
Chd8Q09XV5 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.25■□□□□ 0.03
Chd8Q09XV5 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Chd8Q09XV5 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chd8Q09XV5 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chd8Q09XV5 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chd8Q09XV5 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chd8Q09XV5 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chd8Q09XV5 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Chd8Q09XV5 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.24■□□□□ 0.03
Chd8Q09XV5 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.24■□□□□ 0.03
Chd8Q09XV5 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC15.24■□□□□ 0.03
Chd8Q09XV5 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chd8Q09XV5 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chd8Q09XV5 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chd8Q09XV5 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chd8Q09XV5 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chd8Q09XV5 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chd8Q09XV5 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chd8Q09XV5 Mir1895-201ENSMUST00000122615 79 ntBASIC15.24■□□□□ 0.03
Chd8Q09XV5 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.24■□□□□ 0.03
Chd8Q09XV5 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.24■□□□□ 0.03
Chd8Q09XV5 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.24■□□□□ 0.03
Chd8Q09XV5 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chd8Q09XV5 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd8Q09XV5 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Chd8Q09XV5 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd8Q09XV5 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Chd8Q09XV5 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chd8Q09XV5 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
Chd8Q09XV5 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd8Q09XV5 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Chd8Q09XV5 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd8Q09XV5 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.23■□□□□ 0.03
Chd8Q09XV5 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms