Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1aP97445 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1aP97445 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1aP97445 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1aP97445 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1aP97445 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1aP97445 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1aP97445 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1aP97445 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1aP97445 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.7■□□□□ 0.1
Cacna1aP97445 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Cacna1aP97445 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1aP97445 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cacna1aP97445 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cacna1aP97445 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.69■□□□□ 0.1
Cacna1aP97445 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.69■□□□□ 0.1
Cacna1aP97445 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cacna1aP97445 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cacna1aP97445 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cacna1aP97445 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.69■□□□□ 0.1
Cacna1aP97445 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cacna1aP97445 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cacna1aP97445 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Cacna1aP97445 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.69■□□□□ 0.1
Cacna1aP97445 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cacna1aP97445 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cacna1aP97445 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cacna1aP97445 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.69■□□□□ 0.1
Cacna1aP97445 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cacna1aP97445 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cacna1aP97445 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Cacna1aP97445 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cacna1aP97445 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Cacna1aP97445 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.69■□□□□ 0.1
Cacna1aP97445 Gm5264-201ENSMUST00000190584 848 ntBASIC15.69■□□□□ 0.1
Cacna1aP97445 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cacna1aP97445 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cacna1aP97445 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.69■□□□□ 0.1
Cacna1aP97445 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1aP97445 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Cacna1aP97445 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1aP97445 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1aP97445 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1aP97445 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1aP97445 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.68■□□□□ 0.1
Cacna1aP97445 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1aP97445 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC15.68■□□□□ 0.1
Cacna1aP97445 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1aP97445 Gm10175-201ENSMUST00000086013 645 ntBASIC15.68■□□□□ 0.1
Cacna1aP97445 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Cacna1aP97445 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.68■□□□□ 0.1
Cacna1aP97445 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.68■□□□□ 0.1
Cacna1aP97445 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1aP97445 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1aP97445 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1aP97445 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1aP97445 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1aP97445 Gm11336-201ENSMUST00000118168 334 ntBASIC15.68■□□□□ 0.1
Cacna1aP97445 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1aP97445 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.68■□□□□ 0.1
Cacna1aP97445 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1aP97445 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.68■□□□□ 0.1
Cacna1aP97445 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1aP97445 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1aP97445 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1aP97445 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1aP97445 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.67■□□□□ 0.1
Cacna1aP97445 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Cacna1aP97445 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1aP97445 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Cacna1aP97445 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1aP97445 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1aP97445 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1aP97445 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Cacna1aP97445 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1aP97445 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cacna1aP97445 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.67■□□□□ 0.1
Cacna1aP97445 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.67■□□□□ 0.1
Cacna1aP97445 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1aP97445 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1aP97445 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.67■□□□□ 0.1
Cacna1aP97445 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1aP97445 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1aP97445 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1aP97445 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1aP97445 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1aP97445 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1aP97445 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Cacna1aP97445 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1aP97445 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1aP97445 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1aP97445 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cacna1aP97445 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1aP97445 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1aP97445 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Cacna1aP97445 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Cacna1aP97445 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1aP97445 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1aP97445 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1aP97445 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms