Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh6P97326 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdh6P97326 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Cdh6P97326 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh6P97326 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh6P97326 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cdh6P97326 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.29■□□□□ 0.36
Cdh6P97326 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh6P97326 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh6P97326 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.29■□□□□ 0.36
Cdh6P97326 Mir6982-201ENSMUST00000184354 68 ntBASIC17.29■□□□□ 0.36
Cdh6P97326 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh6P97326 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cdh6P97326 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh6P97326 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh6P97326 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.29■□□□□ 0.36
Cdh6P97326 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.29■□□□□ 0.36
Cdh6P97326 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh6P97326 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh6P97326 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh6P97326 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh6P97326 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh6P97326 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh6P97326 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh6P97326 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh6P97326 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh6P97326 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh6P97326 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cdh6P97326 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cdh6P97326 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh6P97326 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh6P97326 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh6P97326 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh6P97326 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh6P97326 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh6P97326 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh6P97326 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.27■□□□□ 0.36
Cdh6P97326 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh6P97326 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh6P97326 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh6P97326 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Cdh6P97326 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh6P97326 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh6P97326 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh6P97326 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.27■□□□□ 0.36
Cdh6P97326 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh6P97326 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh6P97326 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Cdh6P97326 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Cdh6P97326 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh6P97326 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh6P97326 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.27■□□□□ 0.35
Cdh6P97326 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdh6P97326 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdh6P97326 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdh6P97326 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdh6P97326 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdh6P97326 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdh6P97326 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdh6P97326 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdh6P97326 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Cdh6P97326 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.26■□□□□ 0.35
Cdh6P97326 Gm11539-201ENSMUST00000119837 557 ntBASIC17.26■□□□□ 0.35
Cdh6P97326 Gm13436-201ENSMUST00000120418 567 ntBASIC17.26■□□□□ 0.35
Cdh6P97326 Gm18958-201ENSMUST00000174258 762 ntBASIC17.26■□□□□ 0.35
Cdh6P97326 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdh6P97326 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdh6P97326 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdh6P97326 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdh6P97326 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh6P97326 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh6P97326 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh6P97326 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh6P97326 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh6P97326 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Cdh6P97326 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh6P97326 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh6P97326 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh6P97326 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh6P97326 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Cdh6P97326 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh6P97326 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh6P97326 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh6P97326 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Cdh6P97326 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh6P97326 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh6P97326 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh6P97326 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Cdh6P97326 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh6P97326 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh6P97326 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh6P97326 Gm13559-201ENSMUST00000120476 863 ntBASIC17.24■□□□□ 0.35
Cdh6P97326 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.24■□□□□ 0.35
Cdh6P97326 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh6P97326 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh6P97326 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh6P97326 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Cdh6P97326 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh6P97326 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh6P97326 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms