Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
PrkdcP97313 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
PrkdcP97313 Mir8117-201ENSMUST00000184773 107 ntBASIC11.7□□□□□ -0.54
PrkdcP97313 Gm8396-201ENSMUST00000057361 823 ntBASIC11.7□□□□□ -0.54
PrkdcP97313 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
PrkdcP97313 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
PrkdcP97313 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
PrkdcP97313 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
PrkdcP97313 Gm9194-201ENSMUST00000220749 1447 ntBASIC11.7□□□□□ -0.54
PrkdcP97313 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
PrkdcP97313 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
PrkdcP97313 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
PrkdcP97313 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
PrkdcP97313 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
PrkdcP97313 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
PrkdcP97313 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
PrkdcP97313 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
PrkdcP97313 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
PrkdcP97313 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
PrkdcP97313 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC11.7□□□□□ -0.54
PrkdcP97313 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
PrkdcP97313 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
PrkdcP97313 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
PrkdcP97313 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
PrkdcP97313 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC11.7□□□□□ -0.54
PrkdcP97313 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
PrkdcP97313 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
PrkdcP97313 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC11.7□□□□□ -0.54
PrkdcP97313 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
PrkdcP97313 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC11.7□□□□□ -0.54
PrkdcP97313 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
PrkdcP97313 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC11.7□□□□□ -0.54
PrkdcP97313 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
PrkdcP97313 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC11.7□□□□□ -0.54
PrkdcP97313 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
PrkdcP97313 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
PrkdcP97313 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
PrkdcP97313 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
PrkdcP97313 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
PrkdcP97313 Gm6184-201ENSMUST00000120403 1261 ntBASIC11.69□□□□□ -0.54
PrkdcP97313 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC11.69□□□□□ -0.54
PrkdcP97313 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
PrkdcP97313 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
PrkdcP97313 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
PrkdcP97313 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
PrkdcP97313 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.69□□□□□ -0.54
PrkdcP97313 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
PrkdcP97313 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
PrkdcP97313 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
PrkdcP97313 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
PrkdcP97313 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
PrkdcP97313 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC11.69□□□□□ -0.54
PrkdcP97313 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC11.69□□□□□ -0.54
PrkdcP97313 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
PrkdcP97313 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
PrkdcP97313 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC11.68□□□□□ -0.54
PrkdcP97313 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
PrkdcP97313 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
PrkdcP97313 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
PrkdcP97313 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
PrkdcP97313 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
PrkdcP97313 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC11.68□□□□□ -0.54
PrkdcP97313 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC11.68□□□□□ -0.54
PrkdcP97313 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
PrkdcP97313 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
PrkdcP97313 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
PrkdcP97313 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
PrkdcP97313 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC11.68□□□□□ -0.54
PrkdcP97313 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC11.68□□□□□ -0.54
PrkdcP97313 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
PrkdcP97313 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
PrkdcP97313 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
PrkdcP97313 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
PrkdcP97313 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
PrkdcP97313 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC11.68□□□□□ -0.54
PrkdcP97313 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
PrkdcP97313 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
PrkdcP97313 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
PrkdcP97313 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
PrkdcP97313 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
PrkdcP97313 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
PrkdcP97313 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
PrkdcP97313 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
PrkdcP97313 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
PrkdcP97313 Gm13186-201ENSMUST00000118031 316 ntBASIC11.67□□□□□ -0.54
PrkdcP97313 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC11.67□□□□□ -0.54
PrkdcP97313 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
PrkdcP97313 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
PrkdcP97313 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC11.67□□□□□ -0.54
PrkdcP97313 Gm15590-201ENSMUST00000078419 552 ntBASIC11.67□□□□□ -0.54
PrkdcP97313 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
PrkdcP97313 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
PrkdcP97313 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
PrkdcP97313 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
PrkdcP97313 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC11.67□□□□□ -0.54
PrkdcP97313 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC11.67□□□□□ -0.54
PrkdcP97313 Gm7506-201ENSMUST00000207758 815 ntBASIC11.67□□□□□ -0.54
PrkdcP97313 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
PrkdcP97313 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
PrkdcP97313 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms