Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim43cP86449 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim43cP86449 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.55■□□□□ 0.56
Trim43cP86449 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim43cP86449 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim43cP86449 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim43cP86449 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.55■□□□□ 0.56
Trim43cP86449 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim43cP86449 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim43cP86449 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim43cP86449 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim43cP86449 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim43cP86449 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim43cP86449 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Trim43cP86449 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim43cP86449 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim43cP86449 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim43cP86449 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Trim43cP86449 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim43cP86449 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim43cP86449 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim43cP86449 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim43cP86449 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim43cP86449 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim43cP86449 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.54■□□□□ 0.56
Trim43cP86449 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Trim43cP86449 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim43cP86449 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim43cP86449 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim43cP86449 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim43cP86449 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim43cP86449 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Trim43cP86449 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim43cP86449 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.54■□□□□ 0.56
Trim43cP86449 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim43cP86449 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim43cP86449 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim43cP86449 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim43cP86449 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim43cP86449 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim43cP86449 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim43cP86449 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Trim43cP86449 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim43cP86449 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim43cP86449 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim43cP86449 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.53■□□□□ 0.56
Trim43cP86449 Gm11539-201ENSMUST00000119837 557 ntBASIC18.53■□□□□ 0.56
Trim43cP86449 Gm13436-201ENSMUST00000120418 567 ntBASIC18.53■□□□□ 0.56
Trim43cP86449 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Trim43cP86449 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Trim43cP86449 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Trim43cP86449 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim43cP86449 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim43cP86449 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim43cP86449 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim43cP86449 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim43cP86449 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim43cP86449 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim43cP86449 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim43cP86449 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim43cP86449 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim43cP86449 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim43cP86449 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Trim43cP86449 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim43cP86449 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.52■□□□□ 0.56
Trim43cP86449 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim43cP86449 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim43cP86449 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.52■□□□□ 0.56
Trim43cP86449 Gm13559-201ENSMUST00000120476 863 ntBASIC18.52■□□□□ 0.56
Trim43cP86449 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Trim43cP86449 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.52■□□□□ 0.56
Trim43cP86449 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim43cP86449 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Trim43cP86449 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.52■□□□□ 0.56
Trim43cP86449 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim43cP86449 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trim43cP86449 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim43cP86449 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim43cP86449 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.52■□□□□ 0.55
Trim43cP86449 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Trim43cP86449 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim43cP86449 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim43cP86449 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Trim43cP86449 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim43cP86449 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim43cP86449 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim43cP86449 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.51■□□□□ 0.55
Trim43cP86449 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim43cP86449 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Trim43cP86449 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Trim43cP86449 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim43cP86449 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim43cP86449 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Trim43cP86449 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim43cP86449 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.51■□□□□ 0.55
Trim43cP86449 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Trim43cP86449 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim43cP86449 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Trim43cP86449 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.5■□□□□ 0.55
Trim43cP86449 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms