Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43bP86448 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43bP86448 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43bP86448 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43bP86448 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.54■□□□□ 0.4
Trim43bP86448 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trim43bP86448 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim43bP86448 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim43bP86448 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim43bP86448 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.53■□□□□ 0.4
Trim43bP86448 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim43bP86448 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim43bP86448 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.53■□□□□ 0.4
Trim43bP86448 Gm38285-201ENSMUST00000192928 922 ntBASIC17.53■□□□□ 0.4
Trim43bP86448 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim43bP86448 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.53■□□□□ 0.4
Trim43bP86448 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim43bP86448 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim43bP86448 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim43bP86448 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim43bP86448 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim43bP86448 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim43bP86448 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim43bP86448 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trim43bP86448 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim43bP86448 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim43bP86448 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim43bP86448 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Trim43bP86448 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim43bP86448 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim43bP86448 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim43bP86448 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim43bP86448 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim43bP86448 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim43bP86448 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim43bP86448 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim43bP86448 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim43bP86448 Gm10138-203ENSMUST00000206952 366 ntBASIC17.52■□□□□ 0.4
Trim43bP86448 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Trim43bP86448 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim43bP86448 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim43bP86448 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim43bP86448 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim43bP86448 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim43bP86448 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim43bP86448 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim43bP86448 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim43bP86448 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Trim43bP86448 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.51■□□□□ 0.39
Trim43bP86448 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43bP86448 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.51■□□□□ 0.39
Trim43bP86448 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.51■□□□□ 0.39
Trim43bP86448 Gm10252-201ENSMUST00000209541 832 ntBASIC17.51■□□□□ 0.39
Trim43bP86448 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43bP86448 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43bP86448 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43bP86448 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43bP86448 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43bP86448 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Trim43bP86448 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim43bP86448 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Trim43bP86448 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43bP86448 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43bP86448 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43bP86448 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43bP86448 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43bP86448 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43bP86448 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43bP86448 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.5■□□□□ 0.39
Trim43bP86448 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.5■□□□□ 0.39
Trim43bP86448 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43bP86448 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43bP86448 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43bP86448 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43bP86448 Dancr-204ENSMUST00000132389 2347 ntBASIC17.5■□□□□ 0.39
Trim43bP86448 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Trim43bP86448 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43bP86448 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43bP86448 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim43bP86448 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim43bP86448 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.49■□□□□ 0.39
Trim43bP86448 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim43bP86448 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim43bP86448 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim43bP86448 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.49■□□□□ 0.39
Trim43bP86448 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.49■□□□□ 0.39
Trim43bP86448 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.49■□□□□ 0.39
Trim43bP86448 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim43bP86448 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trim43bP86448 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim43bP86448 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim43bP86448 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim43bP86448 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trim43bP86448 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim43bP86448 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim43bP86448 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim43bP86448 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim43bP86448 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim43bP86448 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trim43bP86448 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms