Protein–RNA interactions for Protein: P70279

Surf6, Surfeit locus protein 6, mousemouse

Known RBP Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Surf6P70279 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.76■□□□□ 0.43
Surf6P70279 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Surf6P70279 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Surf6P70279 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.76■□□□□ 0.43
Surf6P70279 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Surf6P70279 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Surf6P70279 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Surf6P70279 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.76■□□□□ 0.43
Surf6P70279 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Surf6P70279 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Surf6P70279 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.76■□□□□ 0.43
Surf6P70279 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Surf6P70279 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Surf6P70279 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Surf6P70279 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Surf6P70279 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Surf6P70279 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Surf6P70279 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Surf6P70279 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Surf6P70279 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Surf6P70279 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Surf6P70279 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Surf6P70279 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Surf6P70279 AV356131-201ENSMUST00000206201 750 ntBASIC17.75■□□□□ 0.43
Surf6P70279 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Surf6P70279 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.75■□□□□ 0.43
Surf6P70279 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Surf6P70279 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Surf6P70279 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Surf6P70279 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Surf6P70279 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Surf6P70279 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.74■□□□□ 0.43
Surf6P70279 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Surf6P70279 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Surf6P70279 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Surf6P70279 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Surf6P70279 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Surf6P70279 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Surf6P70279 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Surf6P70279 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Surf6P70279 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Surf6P70279 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Surf6P70279 Gm10849-201ENSMUST00000100397 618 ntBASIC17.74■□□□□ 0.43
Surf6P70279 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Surf6P70279 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Surf6P70279 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Surf6P70279 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Surf6P70279 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Surf6P70279 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Surf6P70279 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Surf6P70279 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Surf6P70279 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Surf6P70279 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Surf6P70279 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Surf6P70279 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Surf6P70279 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Surf6P70279 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Surf6P70279 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Surf6P70279 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Surf6P70279 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.73■□□□□ 0.43
Surf6P70279 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Surf6P70279 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.73■□□□□ 0.43
Surf6P70279 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Surf6P70279 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.73■□□□□ 0.43
Surf6P70279 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Surf6P70279 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Surf6P70279 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Surf6P70279 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Surf6P70279 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Surf6P70279 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Surf6P70279 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Surf6P70279 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.72■□□□□ 0.43
Surf6P70279 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.72■□□□□ 0.43
Surf6P70279 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Surf6P70279 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Surf6P70279 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.72■□□□□ 0.43
Surf6P70279 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Surf6P70279 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Surf6P70279 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.72■□□□□ 0.43
Surf6P70279 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Surf6P70279 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Surf6P70279 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Surf6P70279 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Surf6P70279 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.72■□□□□ 0.43
Surf6P70279 Gm10033-202ENSMUST00000211874 928 ntBASIC17.72■□□□□ 0.43
Surf6P70279 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Surf6P70279 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Surf6P70279 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.72■□□□□ 0.43
Surf6P70279 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Surf6P70279 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Surf6P70279 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Surf6P70279 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Surf6P70279 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Surf6P70279 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Surf6P70279 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Surf6P70279 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Surf6P70279 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Surf6P70279 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Surf6P70279 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Surf6P70279 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms