Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 Zfp783-201ENSMUST00000095946 670 ntBASIC23.59■■□□□ 1.37
Stra8P70278 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Stra8P70278 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
Stra8P70278 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Stra8P70278 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Stra8P70278 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Stra8P70278 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Stra8P70278 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Stra8P70278 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Stra8P70278 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Stra8P70278 Gm12669-201ENSMUST00000122162 1009 ntBASIC23.58■■□□□ 1.37
Stra8P70278 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
Stra8P70278 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Stra8P70278 Mtag2-201ENSMUST00000058665 714 ntBASIC23.58■■□□□ 1.37
Stra8P70278 Gm37166-201ENSMUST00000195473 2474 ntBASIC23.58■■□□□ 1.37
Stra8P70278 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Stra8P70278 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Stra8P70278 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Stra8P70278 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Stra8P70278 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Stra8P70278 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Stra8P70278 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC23.57■■□□□ 1.36
Stra8P70278 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Stra8P70278 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Stra8P70278 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Stra8P70278 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Stra8P70278 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Stra8P70278 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Stra8P70278 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Stra8P70278 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Stra8P70278 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Stra8P70278 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Stra8P70278 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Stra8P70278 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
Stra8P70278 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Stra8P70278 AC108858.1-201ENSMUST00000228461 1498 ntBASIC23.56■■□□□ 1.36
Stra8P70278 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Stra8P70278 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Stra8P70278 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Stra8P70278 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Stra8P70278 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Stra8P70278 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC23.56■■□□□ 1.36
Stra8P70278 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Stra8P70278 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Stra8P70278 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
Stra8P70278 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Stra8P70278 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Stra8P70278 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Stra8P70278 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Stra8P70278 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Stra8P70278 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Stra8P70278 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
Stra8P70278 Gm37856-201ENSMUST00000191634 999 ntBASIC23.55■■□□□ 1.36
Stra8P70278 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Stra8P70278 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC23.55■■□□□ 1.36
Stra8P70278 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC23.55■■□□□ 1.36
Stra8P70278 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Stra8P70278 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC23.55■■□□□ 1.36
Stra8P70278 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
Stra8P70278 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Stra8P70278 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Stra8P70278 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Stra8P70278 Gm11249-201ENSMUST00000117071 859 ntBASIC23.54■■□□□ 1.36
Stra8P70278 Gm10653-202ENSMUST00000139570 835 ntBASIC23.54■■□□□ 1.36
Stra8P70278 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC23.54■■□□□ 1.36
Stra8P70278 Gm38285-201ENSMUST00000192928 922 ntBASIC23.54■■□□□ 1.36
Stra8P70278 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Stra8P70278 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC23.54■■□□□ 1.36
Stra8P70278 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Stra8P70278 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Stra8P70278 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Stra8P70278 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
Stra8P70278 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Stra8P70278 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Stra8P70278 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
Stra8P70278 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Stra8P70278 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Stra8P70278 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Stra8P70278 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Stra8P70278 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Stra8P70278 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Stra8P70278 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Stra8P70278 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Stra8P70278 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC23.52■■□□□ 1.36
Stra8P70278 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Stra8P70278 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Stra8P70278 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
Stra8P70278 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC23.52■■□□□ 1.36
Stra8P70278 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Stra8P70278 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Stra8P70278 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Stra8P70278 Trmt13-210ENSMUST00000198454 880 ntBASIC23.52■■□□□ 1.36
Stra8P70278 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
Stra8P70278 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
Stra8P70278 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC23.52■■□□□ 1.36
Stra8P70278 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Stra8P70278 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Stra8P70278 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
Stra8P70278 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Stra8P70278 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms