Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hmgb1P63158 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmgb1P63158 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Hmgb1P63158 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmgb1P63158 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hmgb1P63158 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hmgb1P63158 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.75■□□□□ 0.59
Hmgb1P63158 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.75■□□□□ 0.59
Hmgb1P63158 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.75■□□□□ 0.59
Hmgb1P63158 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Hmgb1P63158 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC18.75■□□□□ 0.59
Hmgb1P63158 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hmgb1P63158 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.75■□□□□ 0.59
Hmgb1P63158 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hmgb1P63158 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgb1P63158 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgb1P63158 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Hmgb1P63158 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.74■□□□□ 0.59
Hmgb1P63158 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgb1P63158 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgb1P63158 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgb1P63158 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Hmgb1P63158 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.74■□□□□ 0.59
Hmgb1P63158 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgb1P63158 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgb1P63158 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgb1P63158 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgb1P63158 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.74■□□□□ 0.59
Hmgb1P63158 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgb1P63158 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgb1P63158 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgb1P63158 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hmgb1P63158 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Hmgb1P63158 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hmgb1P63158 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.73■□□□□ 0.59
Hmgb1P63158 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmgb1P63158 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hmgb1P63158 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.73■□□□□ 0.59
Hmgb1P63158 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmgb1P63158 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmgb1P63158 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hmgb1P63158 Gm5643-201ENSMUST00000117081 966 ntBASIC18.73■□□□□ 0.59
Hmgb1P63158 Gm15378-201ENSMUST00000121894 207 ntBASIC18.73■□□□□ 0.59
Hmgb1P63158 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hmgb1P63158 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmgb1P63158 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.73■□□□□ 0.59
Hmgb1P63158 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.73■□□□□ 0.59
Hmgb1P63158 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmgb1P63158 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmgb1P63158 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmgb1P63158 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmgb1P63158 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Hmgb1P63158 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hmgb1P63158 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hmgb1P63158 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hmgb1P63158 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hmgb1P63158 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.72■□□□□ 0.59
Hmgb1P63158 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Hmgb1P63158 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Hmgb1P63158 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.72■□□□□ 0.59
Hmgb1P63158 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hmgb1P63158 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hmgb1P63158 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Hmgb1P63158 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hmgb1P63158 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hmgb1P63158 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hmgb1P63158 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hmgb1P63158 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Hmgb1P63158 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hmgb1P63158 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.71■□□□□ 0.59
Hmgb1P63158 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hmgb1P63158 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hmgb1P63158 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Hmgb1P63158 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hmgb1P63158 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Hmgb1P63158 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.58
Hmgb1P63158 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hmgb1P63158 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hmgb1P63158 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hmgb1P63158 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hmgb1P63158 Gm37025-201ENSMUST00000195159 829 ntBASIC18.7■□□□□ 0.58
Hmgb1P63158 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hmgb1P63158 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hmgb1P63158 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.7■□□□□ 0.58
Hmgb1P63158 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Hmgb1P63158 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hmgb1P63158 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Hmgb1P63158 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hmgb1P63158 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hmgb1P63158 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Hmgb1P63158 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hmgb1P63158 Gm17661-201ENSMUST00000170317 270 ntBASIC18.69■□□□□ 0.58
Hmgb1P63158 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.69■□□□□ 0.58
Hmgb1P63158 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hmgb1P63158 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hmgb1P63158 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hmgb1P63158 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hmgb1P63158 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.69■□□□□ 0.58
Hmgb1P63158 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Hmgb1P63158 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms