Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tubgcp3P58854 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tubgcp3P58854 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Tubgcp3P58854 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tubgcp3P58854 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Tubgcp3P58854 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.42■□□□□ 0.38
Tubgcp3P58854 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Tubgcp3P58854 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tubgcp3P58854 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tubgcp3P58854 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Tubgcp3P58854 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tubgcp3P58854 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tubgcp3P58854 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tubgcp3P58854 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tubgcp3P58854 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Tubgcp3P58854 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tubgcp3P58854 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tubgcp3P58854 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tubgcp3P58854 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Tubgcp3P58854 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tubgcp3P58854 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.41■□□□□ 0.38
Tubgcp3P58854 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tubgcp3P58854 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Tubgcp3P58854 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Tubgcp3P58854 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tubgcp3P58854 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Tubgcp3P58854 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tubgcp3P58854 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tubgcp3P58854 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tubgcp3P58854 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tubgcp3P58854 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tubgcp3P58854 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tubgcp3P58854 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tubgcp3P58854 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tubgcp3P58854 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Tubgcp3P58854 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tubgcp3P58854 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tubgcp3P58854 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tubgcp3P58854 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tubgcp3P58854 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tubgcp3P58854 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tubgcp3P58854 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tubgcp3P58854 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Tubgcp3P58854 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.4■□□□□ 0.38
Tubgcp3P58854 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.4■□□□□ 0.38
Tubgcp3P58854 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tubgcp3P58854 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Tubgcp3P58854 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tubgcp3P58854 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Tubgcp3P58854 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tubgcp3P58854 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tubgcp3P58854 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Tubgcp3P58854 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Tubgcp3P58854 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Tubgcp3P58854 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Tubgcp3P58854 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tubgcp3P58854 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tubgcp3P58854 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.39■□□□□ 0.37
Tubgcp3P58854 Mir1199-201ENSMUST00000117015 119 ntBASIC17.39■□□□□ 0.37
Tubgcp3P58854 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.39■□□□□ 0.37
Tubgcp3P58854 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tubgcp3P58854 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.39■□□□□ 0.37
Tubgcp3P58854 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tubgcp3P58854 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tubgcp3P58854 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tubgcp3P58854 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tubgcp3P58854 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tubgcp3P58854 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tubgcp3P58854 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tubgcp3P58854 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tubgcp3P58854 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tubgcp3P58854 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Tubgcp3P58854 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.38■□□□□ 0.37
Tubgcp3P58854 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Tubgcp3P58854 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tubgcp3P58854 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.38■□□□□ 0.37
Tubgcp3P58854 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tubgcp3P58854 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tubgcp3P58854 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tubgcp3P58854 Gm27011-201ENSMUST00000182352 972 ntBASIC17.38■□□□□ 0.37
Tubgcp3P58854 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.38■□□□□ 0.37
Tubgcp3P58854 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tubgcp3P58854 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tubgcp3P58854 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.38■□□□□ 0.37
Tubgcp3P58854 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tubgcp3P58854 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tubgcp3P58854 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tubgcp3P58854 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tubgcp3P58854 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tubgcp3P58854 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tubgcp3P58854 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tubgcp3P58854 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tubgcp3P58854 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tubgcp3P58854 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Tubgcp3P58854 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Tubgcp3P58854 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tubgcp3P58854 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tubgcp3P58854 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Tubgcp3P58854 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
Tubgcp3P58854 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms