Protein–RNA interactions for Protein: P58749

Tm6sf1, Transmembrane 6 superfamily member 1, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf1P58749 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Tm6sf1P58749 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tm6sf1P58749 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tm6sf1P58749 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Tm6sf1P58749 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tm6sf1P58749 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Tm6sf1P58749 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Tm6sf1P58749 Gm6433-201ENSMUST00000118634 875 ntBASIC20.91■□□□□ 0.94
Tm6sf1P58749 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Tm6sf1P58749 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.91■□□□□ 0.94
Tm6sf1P58749 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tm6sf1P58749 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Tm6sf1P58749 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC20.91■□□□□ 0.94
Tm6sf1P58749 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tm6sf1P58749 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Tm6sf1P58749 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tm6sf1P58749 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Tm6sf1P58749 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tm6sf1P58749 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tm6sf1P58749 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tm6sf1P58749 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tm6sf1P58749 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tm6sf1P58749 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tm6sf1P58749 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Tm6sf1P58749 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tm6sf1P58749 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tm6sf1P58749 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tm6sf1P58749 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Tm6sf1P58749 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tm6sf1P58749 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.9■□□□□ 0.94
Tm6sf1P58749 AC153881.2-201ENSMUST00000214877 204 ntBASIC20.9■□□□□ 0.94
Tm6sf1P58749 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tm6sf1P58749 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tm6sf1P58749 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Tm6sf1P58749 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tm6sf1P58749 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Tm6sf1P58749 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Tm6sf1P58749 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Tm6sf1P58749 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Tm6sf1P58749 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Tm6sf1P58749 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Tm6sf1P58749 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Tm6sf1P58749 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Tm6sf1P58749 Actl10-202ENSMUST00000226583 1501 ntBASIC20.89■□□□□ 0.94
Tm6sf1P58749 Gm13216-201ENSMUST00000117145 591 ntBASIC20.89■□□□□ 0.93
Tm6sf1P58749 Gm13474-201ENSMUST00000122466 815 ntBASIC20.89■□□□□ 0.93
Tm6sf1P58749 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Tm6sf1P58749 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Tm6sf1P58749 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
Tm6sf1P58749 Gm45058-201ENSMUST00000205810 766 ntBASIC20.89■□□□□ 0.93
Tm6sf1P58749 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.89■□□□□ 0.93
Tm6sf1P58749 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tm6sf1P58749 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tm6sf1P58749 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tm6sf1P58749 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tm6sf1P58749 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tm6sf1P58749 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tm6sf1P58749 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tm6sf1P58749 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Tm6sf1P58749 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Tm6sf1P58749 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tm6sf1P58749 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tm6sf1P58749 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC20.88■□□□□ 0.93
Tm6sf1P58749 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tm6sf1P58749 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Tm6sf1P58749 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.88■□□□□ 0.93
Tm6sf1P58749 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Tm6sf1P58749 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Tm6sf1P58749 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tm6sf1P58749 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tm6sf1P58749 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Tm6sf1P58749 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tm6sf1P58749 Gm8839-201ENSMUST00000121279 1645 ntBASIC20.88■□□□□ 0.93
Tm6sf1P58749 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tm6sf1P58749 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC20.88■□□□□ 0.93
Tm6sf1P58749 Gm7292-201ENSMUST00000194706 2527 ntBASIC20.87■□□□□ 0.93
Tm6sf1P58749 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Tm6sf1P58749 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Tm6sf1P58749 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tm6sf1P58749 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tm6sf1P58749 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Tm6sf1P58749 Gm13186-201ENSMUST00000118031 316 ntBASIC20.87■□□□□ 0.93
Tm6sf1P58749 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tm6sf1P58749 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Tm6sf1P58749 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Tm6sf1P58749 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Tm6sf1P58749 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tm6sf1P58749 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tm6sf1P58749 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Tm6sf1P58749 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tm6sf1P58749 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC20.86■□□□□ 0.93
Tm6sf1P58749 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tm6sf1P58749 Gm3272-201ENSMUST00000181181 1229 ntBASIC20.86■□□□□ 0.93
Tm6sf1P58749 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tm6sf1P58749 Gm10566-201ENSMUST00000086739 996 ntBASIC20.86■□□□□ 0.93
Tm6sf1P58749 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tm6sf1P58749 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tm6sf1P58749 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Tm6sf1P58749 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Tm6sf1P58749 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms