Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Sssca1P56873 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sssca1P56873 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sssca1P56873 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sssca1P56873 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sssca1P56873 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.82□□□□□ -0.2
Sssca1P56873 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.82□□□□□ -0.2
Sssca1P56873 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC13.82□□□□□ -0.2
Sssca1P56873 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sssca1P56873 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sssca1P56873 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sssca1P56873 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sssca1P56873 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC13.82□□□□□ -0.2
Sssca1P56873 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sssca1P56873 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sssca1P56873 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Sssca1P56873 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sssca1P56873 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sssca1P56873 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sssca1P56873 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sssca1P56873 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sssca1P56873 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sssca1P56873 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sssca1P56873 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Sssca1P56873 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sssca1P56873 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sssca1P56873 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sssca1P56873 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sssca1P56873 Gm29241-201ENSMUST00000189260 1096 ntBASIC13.81□□□□□ -0.2
Sssca1P56873 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC13.81□□□□□ -0.2
Sssca1P56873 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sssca1P56873 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sssca1P56873 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Sssca1P56873 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sssca1P56873 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sssca1P56873 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sssca1P56873 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sssca1P56873 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sssca1P56873 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Sssca1P56873 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sssca1P56873 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sssca1P56873 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sssca1P56873 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Sssca1P56873 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sssca1P56873 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sssca1P56873 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sssca1P56873 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC13.8□□□□□ -0.2
Sssca1P56873 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sssca1P56873 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.8□□□□□ -0.2
Sssca1P56873 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Sssca1P56873 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sssca1P56873 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sssca1P56873 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sssca1P56873 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sssca1P56873 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sssca1P56873 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Sssca1P56873 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC13.8□□□□□ -0.2
Sssca1P56873 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sssca1P56873 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sssca1P56873 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Sssca1P56873 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sssca1P56873 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.79□□□□□ -0.2
Sssca1P56873 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sssca1P56873 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sssca1P56873 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Sssca1P56873 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sssca1P56873 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sssca1P56873 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sssca1P56873 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sssca1P56873 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sssca1P56873 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sssca1P56873 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sssca1P56873 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sssca1P56873 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sssca1P56873 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sssca1P56873 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sssca1P56873 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sssca1P56873 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sssca1P56873 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sssca1P56873 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sssca1P56873 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sssca1P56873 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sssca1P56873 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sssca1P56873 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sssca1P56873 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Sssca1P56873 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sssca1P56873 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sssca1P56873 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sssca1P56873 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sssca1P56873 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sssca1P56873 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Sssca1P56873 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sssca1P56873 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.78□□□□□ -0.2
Sssca1P56873 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sssca1P56873 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Sssca1P56873 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sssca1P56873 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sssca1P56873 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sssca1P56873 Gm13216-201ENSMUST00000117145 591 ntBASIC13.78□□□□□ -0.2
Sssca1P56873 Gm11927-201ENSMUST00000118472 759 ntBASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms