Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lim2P56563 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Lim2P56563 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lim2P56563 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lim2P56563 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lim2P56563 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Lim2P56563 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lim2P56563 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Lim2P56563 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lim2P56563 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lim2P56563 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lim2P56563 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lim2P56563 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Lim2P56563 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lim2P56563 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lim2P56563 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lim2P56563 Gm6433-201ENSMUST00000118634 875 ntBASIC17.06■□□□□ 0.32
Lim2P56563 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Lim2P56563 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.06■□□□□ 0.32
Lim2P56563 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Lim2P56563 Gm9731-201ENSMUST00000209480 747 ntBASIC17.06■□□□□ 0.32
Lim2P56563 Gm7791-201ENSMUST00000219066 539 ntBASIC17.06■□□□□ 0.32
Lim2P56563 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lim2P56563 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lim2P56563 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lim2P56563 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.06■□□□□ 0.32
Lim2P56563 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lim2P56563 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Lim2P56563 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lim2P56563 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lim2P56563 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.05■□□□□ 0.32
Lim2P56563 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lim2P56563 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lim2P56563 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lim2P56563 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lim2P56563 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Lim2P56563 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Lim2P56563 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Lim2P56563 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lim2P56563 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Lim2P56563 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Lim2P56563 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Lim2P56563 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Lim2P56563 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.05■□□□□ 0.32
Lim2P56563 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lim2P56563 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Lim2P56563 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lim2P56563 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lim2P56563 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lim2P56563 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lim2P56563 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lim2P56563 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lim2P56563 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.04■□□□□ 0.32
Lim2P56563 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lim2P56563 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Lim2P56563 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Lim2P56563 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Lim2P56563 Gm17661-201ENSMUST00000170317 270 ntBASIC17.04■□□□□ 0.32
Lim2P56563 Gm7889-201ENSMUST00000185591 958 ntBASIC17.04■□□□□ 0.32
Lim2P56563 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lim2P56563 Gm9987-201ENSMUST00000069768 567 ntBASIC17.04■□□□□ 0.32
Lim2P56563 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Lim2P56563 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lim2P56563 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Lim2P56563 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Lim2P56563 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lim2P56563 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Lim2P56563 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lim2P56563 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Lim2P56563 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Lim2P56563 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lim2P56563 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.03■□□□□ 0.32
Lim2P56563 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lim2P56563 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lim2P56563 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Lim2P56563 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.03■□□□□ 0.32
Lim2P56563 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Lim2P56563 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.03■□□□□ 0.32
Lim2P56563 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lim2P56563 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Lim2P56563 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.03■□□□□ 0.32
Lim2P56563 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lim2P56563 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Lim2P56563 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Lim2P56563 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lim2P56563 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Lim2P56563 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lim2P56563 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lim2P56563 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lim2P56563 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Lim2P56563 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lim2P56563 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lim2P56563 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lim2P56563 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lim2P56563 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lim2P56563 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lim2P56563 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Lim2P56563 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lim2P56563 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lim2P56563 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms