Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sox3P53784 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.3■□□□□ 0.2
Sox3P53784 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox3P53784 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox3P53784 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox3P53784 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox3P53784 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Sox3P53784 Gm18669-201ENSMUST00000216049 778 ntBASIC16.3■□□□□ 0.2
Sox3P53784 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox3P53784 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox3P53784 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox3P53784 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox3P53784 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox3P53784 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sox3P53784 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox3P53784 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox3P53784 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Sox3P53784 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Sox3P53784 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox3P53784 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox3P53784 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox3P53784 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox3P53784 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.29■□□□□ 0.2
Sox3P53784 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox3P53784 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox3P53784 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Sox3P53784 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox3P53784 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.29■□□□□ 0.2
Sox3P53784 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.29■□□□□ 0.2
Sox3P53784 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox3P53784 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Sox3P53784 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox3P53784 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox3P53784 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Sox3P53784 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.29■□□□□ 0.2
Sox3P53784 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Sox3P53784 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.29■□□□□ 0.2
Sox3P53784 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox3P53784 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.29■□□□□ 0.2
Sox3P53784 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox3P53784 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox3P53784 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.29■□□□□ 0.2
Sox3P53784 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox3P53784 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.29■□□□□ 0.2
Sox3P53784 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox3P53784 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sox3P53784 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox3P53784 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox3P53784 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox3P53784 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox3P53784 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sox3P53784 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox3P53784 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.28■□□□□ 0.2
Sox3P53784 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox3P53784 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Sox3P53784 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox3P53784 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.28■□□□□ 0.2
Sox3P53784 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sox3P53784 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.28■□□□□ 0.2
Sox3P53784 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox3P53784 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox3P53784 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox3P53784 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox3P53784 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.28■□□□□ 0.2
Sox3P53784 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox3P53784 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox3P53784 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox3P53784 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Sox3P53784 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox3P53784 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox3P53784 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox3P53784 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox3P53784 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox3P53784 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sox3P53784 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox3P53784 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Sox3P53784 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sox3P53784 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox3P53784 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.27■□□□□ 0.2
Sox3P53784 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox3P53784 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.27■□□□□ 0.2
Sox3P53784 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox3P53784 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox3P53784 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox3P53784 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
Sox3P53784 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Sox3P53784 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox3P53784 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox3P53784 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Sox3P53784 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox3P53784 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox3P53784 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox3P53784 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox3P53784 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sox3P53784 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Sox3P53784 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Sox3P53784 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox3P53784 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.26■□□□□ 0.19
Sox3P53784 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sox3P53784 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms