Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox1P53783 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox1P53783 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox1P53783 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Sox1P53783 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox1P53783 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.42■□□□□ 0.38
Sox1P53783 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox1P53783 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox1P53783 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sox1P53783 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox1P53783 Gm13312-201ENSMUST00000119631 718 ntBASIC17.42■□□□□ 0.38
Sox1P53783 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.42■□□□□ 0.38
Sox1P53783 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sox1P53783 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox1P53783 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Sox1P53783 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sox1P53783 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sox1P53783 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox1P53783 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox1P53783 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox1P53783 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox1P53783 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Sox1P53783 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox1P53783 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC17.41■□□□□ 0.38
Sox1P53783 Gm29791-202ENSMUST00000207888 369 ntBASIC17.41■□□□□ 0.38
Sox1P53783 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox1P53783 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.41■□□□□ 0.38
Sox1P53783 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.41■□□□□ 0.38
Sox1P53783 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox1P53783 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Sox1P53783 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox1P53783 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sox1P53783 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Sox1P53783 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Sox1P53783 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sox1P53783 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sox1P53783 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Sox1P53783 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Sox1P53783 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox1P53783 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.4■□□□□ 0.38
Sox1P53783 Gm7230-201ENSMUST00000173026 815 ntBASIC17.4■□□□□ 0.38
Sox1P53783 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sox1P53783 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.4■□□□□ 0.38
Sox1P53783 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox1P53783 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox1P53783 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.4■□□□□ 0.38
Sox1P53783 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sox1P53783 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
Sox1P53783 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.4■□□□□ 0.38
Sox1P53783 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Sox1P53783 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Sox1P53783 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Sox1P53783 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox1P53783 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox1P53783 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.39■□□□□ 0.37
Sox1P53783 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Sox1P53783 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Sox1P53783 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sox1P53783 Gm5745-201ENSMUST00000183748 313 ntBASIC17.39■□□□□ 0.37
Sox1P53783 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sox1P53783 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox1P53783 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Sox1P53783 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox1P53783 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox1P53783 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sox1P53783 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox1P53783 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox1P53783 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sox1P53783 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Sox1P53783 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Sox1P53783 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox1P53783 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.38■□□□□ 0.37
Sox1P53783 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox1P53783 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox1P53783 Gm25990-201ENSMUST00000102440 86 ntBASIC17.38■□□□□ 0.37
Sox1P53783 Gm14701-201ENSMUST00000117156 348 ntBASIC17.38■□□□□ 0.37
Sox1P53783 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
Sox1P53783 Gm27000-201ENSMUST00000182943 842 ntBASIC17.38■□□□□ 0.37
Sox1P53783 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.38■□□□□ 0.37
Sox1P53783 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.38■□□□□ 0.37
Sox1P53783 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.38■□□□□ 0.37
Sox1P53783 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox1P53783 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox1P53783 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox1P53783 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox1P53783 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Sox1P53783 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox1P53783 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox1P53783 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sox1P53783 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.37■□□□□ 0.37
Sox1P53783 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox1P53783 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox1P53783 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.37■□□□□ 0.37
Sox1P53783 Gm13418-201ENSMUST00000119097 944 ntBASIC17.37■□□□□ 0.37
Sox1P53783 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.37■□□□□ 0.37
Sox1P53783 Gm44872-201ENSMUST00000207864 420 ntBASIC17.37■□□□□ 0.37
Sox1P53783 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.37■□□□□ 0.37
Sox1P53783 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Sox1P53783 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Sox1P53783 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms