Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmga2P52927 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Hmga2P52927 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmga2P52927 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Hmga2P52927 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmga2P52927 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.53□□□□□ -0.08
Hmga2P52927 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmga2P52927 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmga2P52927 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmga2P52927 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmga2P52927 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Hmga2P52927 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmga2P52927 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmga2P52927 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hmga2P52927 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.53□□□□□ -0.08
Hmga2P52927 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmga2P52927 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmga2P52927 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC14.53□□□□□ -0.08
Hmga2P52927 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Hmga2P52927 Mtag2-201ENSMUST00000058665 714 ntBASIC14.53□□□□□ -0.08
Hmga2P52927 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmga2P52927 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmga2P52927 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hmga2P52927 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Hmga2P52927 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.53□□□□□ -0.08
Hmga2P52927 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Hmga2P52927 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hmga2P52927 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hmga2P52927 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Hmga2P52927 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hmga2P52927 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hmga2P52927 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hmga2P52927 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Hmga2P52927 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hmga2P52927 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hmga2P52927 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hmga2P52927 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hmga2P52927 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Hmga2P52927 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.52□□□□□ -0.08
Hmga2P52927 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Hmga2P52927 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmga2P52927 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.52□□□□□ -0.09
Hmga2P52927 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.52□□□□□ -0.09
Hmga2P52927 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmga2P52927 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmga2P52927 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmga2P52927 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
Hmga2P52927 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmga2P52927 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmga2P52927 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmga2P52927 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.52□□□□□ -0.09
Hmga2P52927 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmga2P52927 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmga2P52927 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.51□□□□□ -0.09
Hmga2P52927 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.51□□□□□ -0.09
Hmga2P52927 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Hmga2P52927 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmga2P52927 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmga2P52927 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmga2P52927 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Hmga2P52927 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmga2P52927 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.51□□□□□ -0.09
Hmga2P52927 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.51□□□□□ -0.09
Hmga2P52927 Gm6576-201ENSMUST00000169678 883 ntBASIC14.51□□□□□ -0.09
Hmga2P52927 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hmga2P52927 Gm42642-201ENSMUST00000200683 355 ntBASIC14.51□□□□□ -0.09
Hmga2P52927 AV356131-201ENSMUST00000206201 750 ntBASIC14.51□□□□□ -0.09
Hmga2P52927 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.51□□□□□ -0.09
Hmga2P52927 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmga2P52927 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmga2P52927 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmga2P52927 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmga2P52927 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmga2P52927 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmga2P52927 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmga2P52927 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmga2P52927 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmga2P52927 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmga2P52927 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmga2P52927 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmga2P52927 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.5□□□□□ -0.09
Hmga2P52927 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Hmga2P52927 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmga2P52927 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC14.5□□□□□ -0.09
Hmga2P52927 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmga2P52927 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Hmga2P52927 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.5□□□□□ -0.09
Hmga2P52927 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
Hmga2P52927 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmga2P52927 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Hmga2P52927 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.5□□□□□ -0.09
Hmga2P52927 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmga2P52927 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.5□□□□□ -0.09
Hmga2P52927 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Hmga2P52927 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmga2P52927 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Hmga2P52927 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hmga2P52927 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hmga2P52927 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.49□□□□□ -0.09
Hmga2P52927 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms