Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SftpbP50405 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.48■□□□□ 0.39
SftpbP50405 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SftpbP50405 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SftpbP50405 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SftpbP50405 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.47■□□□□ 0.39
SftpbP50405 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SftpbP50405 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SftpbP50405 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SftpbP50405 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SftpbP50405 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SftpbP50405 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SftpbP50405 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SftpbP50405 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SftpbP50405 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SftpbP50405 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SftpbP50405 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SftpbP50405 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.47■□□□□ 0.39
SftpbP50405 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.47■□□□□ 0.39
SftpbP50405 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SftpbP50405 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.47■□□□□ 0.39
SftpbP50405 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.47■□□□□ 0.39
SftpbP50405 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SftpbP50405 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SftpbP50405 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SftpbP50405 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.47■□□□□ 0.39
SftpbP50405 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SftpbP50405 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SftpbP50405 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SftpbP50405 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SftpbP50405 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SftpbP50405 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.47■□□□□ 0.39
SftpbP50405 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SftpbP50405 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SftpbP50405 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SftpbP50405 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SftpbP50405 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
SftpbP50405 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SftpbP50405 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SftpbP50405 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SftpbP50405 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SftpbP50405 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.46■□□□□ 0.39
SftpbP50405 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SftpbP50405 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SftpbP50405 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SftpbP50405 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SftpbP50405 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SftpbP50405 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SftpbP50405 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.46■□□□□ 0.39
SftpbP50405 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SftpbP50405 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SftpbP50405 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
SftpbP50405 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.45■□□□□ 0.38
SftpbP50405 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SftpbP50405 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SftpbP50405 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SftpbP50405 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SftpbP50405 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SftpbP50405 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SftpbP50405 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SftpbP50405 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SftpbP50405 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.45■□□□□ 0.38
SftpbP50405 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SftpbP50405 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SftpbP50405 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SftpbP50405 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SftpbP50405 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.45■□□□□ 0.38
SftpbP50405 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SftpbP50405 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SftpbP50405 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SftpbP50405 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SftpbP50405 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.44■□□□□ 0.38
SftpbP50405 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SftpbP50405 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SftpbP50405 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
SftpbP50405 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.44■□□□□ 0.38
SftpbP50405 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SftpbP50405 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SftpbP50405 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SftpbP50405 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SftpbP50405 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SftpbP50405 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SftpbP50405 Gm27275-201ENSMUST00000184318 272 ntBASIC17.44■□□□□ 0.38
SftpbP50405 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SftpbP50405 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SftpbP50405 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SftpbP50405 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SftpbP50405 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SftpbP50405 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SftpbP50405 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SftpbP50405 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SftpbP50405 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SftpbP50405 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SftpbP50405 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SftpbP50405 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SftpbP50405 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SftpbP50405 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SftpbP50405 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SftpbP50405 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SftpbP50405 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms