Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-6P43688 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-6P43688 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-6P43688 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-6P43688 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-6P43688 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-6P43688 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-6P43688 Gm27704-201ENSMUST00000185094 107 ntBASIC16.13■□□□□ 0.17
Nkx2-6P43688 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-6P43688 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
Nkx2-6P43688 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Nkx2-6P43688 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.13■□□□□ 0.17
Nkx2-6P43688 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-6P43688 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-6P43688 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Nkx2-6P43688 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-6P43688 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-6P43688 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx2-6P43688 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx2-6P43688 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx2-6P43688 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Nkx2-6P43688 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx2-6P43688 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.12■□□□□ 0.17
Nkx2-6P43688 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Nkx2-6P43688 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Nkx2-6P43688 Gm26039-201ENSMUST00000158152 144 ntBASIC16.12■□□□□ 0.17
Nkx2-6P43688 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.12■□□□□ 0.17
Nkx2-6P43688 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx2-6P43688 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx2-6P43688 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Nkx2-6P43688 Actl10-202ENSMUST00000226583 1501 ntBASIC16.12■□□□□ 0.17
Nkx2-6P43688 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.12■□□□□ 0.17
Nkx2-6P43688 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Nkx2-6P43688 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx2-6P43688 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Nkx2-6P43688 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx2-6P43688 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx2-6P43688 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx2-6P43688 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Nkx2-6P43688 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-6P43688 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-6P43688 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-6P43688 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-6P43688 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.11■□□□□ 0.17
Nkx2-6P43688 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.11■□□□□ 0.17
Nkx2-6P43688 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-6P43688 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.11■□□□□ 0.17
Nkx2-6P43688 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.11■□□□□ 0.17
Nkx2-6P43688 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.11■□□□□ 0.17
Nkx2-6P43688 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.11■□□□□ 0.17
Nkx2-6P43688 Gm27741-201ENSMUST00000185060 237 ntBASIC16.11■□□□□ 0.17
Nkx2-6P43688 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-6P43688 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-6P43688 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-6P43688 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-6P43688 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.11■□□□□ 0.17
Nkx2-6P43688 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-6P43688 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-6P43688 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-6P43688 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-6P43688 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nkx2-6P43688 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nkx2-6P43688 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.1■□□□□ 0.17
Nkx2-6P43688 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nkx2-6P43688 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Nkx2-6P43688 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.1■□□□□ 0.17
Nkx2-6P43688 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Nkx2-6P43688 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Nkx2-6P43688 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nkx2-6P43688 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nkx2-6P43688 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nkx2-6P43688 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.1■□□□□ 0.17
Nkx2-6P43688 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nkx2-6P43688 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nkx2-6P43688 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nkx2-6P43688 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nkx2-6P43688 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Nkx2-6P43688 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nkx2-6P43688 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Nkx2-6P43688 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.1■□□□□ 0.17
Nkx2-6P43688 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Nkx2-6P43688 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Nkx2-6P43688 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nkx2-6P43688 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Nkx2-6P43688 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nkx2-6P43688 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nkx2-6P43688 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nkx2-6P43688 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Nkx2-6P43688 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nkx2-6P43688 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.09■□□□□ 0.17
Nkx2-6P43688 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.09■□□□□ 0.17
Nkx2-6P43688 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.09■□□□□ 0.17
Nkx2-6P43688 Gm18958-201ENSMUST00000174258 762 ntBASIC16.09■□□□□ 0.17
Nkx2-6P43688 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Nkx2-6P43688 Gm17808-201ENSMUST00000200859 894 ntBASIC16.09■□□□□ 0.17
Nkx2-6P43688 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nkx2-6P43688 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Nkx2-6P43688 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nkx2-6P43688 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nkx2-6P43688 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms