Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox18P43680 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox18P43680 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox18P43680 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Sox18P43680 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sox18P43680 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.29■□□□□ 0.2
Sox18P43680 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox18P43680 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox18P43680 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox18P43680 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox18P43680 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.29■□□□□ 0.2
Sox18P43680 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox18P43680 Gm7063-201ENSMUST00000186840 981 ntBASIC16.29■□□□□ 0.2
Sox18P43680 Gm2213-201ENSMUST00000197485 688 ntBASIC16.29■□□□□ 0.2
Sox18P43680 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox18P43680 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox18P43680 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox18P43680 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.29■□□□□ 0.2
Sox18P43680 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox18P43680 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
Sox18P43680 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox18P43680 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox18P43680 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox18P43680 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox18P43680 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox18P43680 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox18P43680 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sox18P43680 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sox18P43680 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox18P43680 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox18P43680 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox18P43680 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox18P43680 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Sox18P43680 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox18P43680 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sox18P43680 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.28■□□□□ 0.2
Sox18P43680 Gm8000-201ENSMUST00000188378 592 ntBASIC16.28■□□□□ 0.2
Sox18P43680 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.28■□□□□ 0.2
Sox18P43680 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.28■□□□□ 0.2
Sox18P43680 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.28■□□□□ 0.2
Sox18P43680 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox18P43680 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox18P43680 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Sox18P43680 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sox18P43680 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sox18P43680 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox18P43680 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox18P43680 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox18P43680 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox18P43680 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox18P43680 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox18P43680 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox18P43680 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Sox18P43680 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.27■□□□□ 0.2
Sox18P43680 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox18P43680 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox18P43680 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox18P43680 Gm1401-201ENSMUST00000122048 772 ntBASIC16.27■□□□□ 0.2
Sox18P43680 Gm11594-201ENSMUST00000122313 162 ntBASIC16.27■□□□□ 0.2
Sox18P43680 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sox18P43680 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sox18P43680 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sox18P43680 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Sox18P43680 Rps4l-201ENSMUST00000071745 943 ntBASIC16.27■□□□□ 0.2
Sox18P43680 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.27■□□□□ 0.2
Sox18P43680 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox18P43680 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox18P43680 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Sox18P43680 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox18P43680 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox18P43680 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Sox18P43680 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox18P43680 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.27■□□□□ 0.19
Sox18P43680 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox18P43680 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox18P43680 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox18P43680 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox18P43680 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox18P43680 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Sox18P43680 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Sox18P43680 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox18P43680 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sox18P43680 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sox18P43680 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox18P43680 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox18P43680 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.26■□□□□ 0.19
Sox18P43680 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox18P43680 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox18P43680 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox18P43680 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Sox18P43680 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sox18P43680 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox18P43680 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.26■□□□□ 0.19
Sox18P43680 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox18P43680 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox18P43680 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.26■□□□□ 0.19
Sox18P43680 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox18P43680 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox18P43680 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Sox18P43680 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms