Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Msh2P43247 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Msh2P43247 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Msh2P43247 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Msh2P43247 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Msh2P43247 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Msh2P43247 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Msh2P43247 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Msh2P43247 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Msh2P43247 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Msh2P43247 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.57■□□□□ 0.4
Msh2P43247 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Msh2P43247 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Msh2P43247 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Msh2P43247 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Msh2P43247 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Msh2P43247 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Msh2P43247 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Msh2P43247 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Msh2P43247 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Msh2P43247 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Msh2P43247 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Msh2P43247 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.56■□□□□ 0.4
Msh2P43247 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Msh2P43247 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Msh2P43247 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Msh2P43247 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Msh2P43247 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Msh2P43247 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Msh2P43247 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Msh2P43247 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Msh2P43247 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Msh2P43247 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Msh2P43247 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Msh2P43247 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Msh2P43247 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh2P43247 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh2P43247 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh2P43247 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh2P43247 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.55■□□□□ 0.4
Msh2P43247 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh2P43247 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Msh2P43247 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh2P43247 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.55■□□□□ 0.4
Msh2P43247 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.55■□□□□ 0.4
Msh2P43247 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh2P43247 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Msh2P43247 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh2P43247 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh2P43247 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh2P43247 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh2P43247 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh2P43247 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.54■□□□□ 0.4
Msh2P43247 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Msh2P43247 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.54■□□□□ 0.4
Msh2P43247 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Msh2P43247 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh2P43247 Gm15375-201ENSMUST00000119510 849 ntBASIC17.54■□□□□ 0.4
Msh2P43247 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.54■□□□□ 0.4
Msh2P43247 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.54■□□□□ 0.4
Msh2P43247 Gm22240-201ENSMUST00000175225 82 ntBASIC17.54■□□□□ 0.4
Msh2P43247 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.54■□□□□ 0.4
Msh2P43247 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Msh2P43247 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.54■□□□□ 0.4
Msh2P43247 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh2P43247 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh2P43247 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh2P43247 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Msh2P43247 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Msh2P43247 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Msh2P43247 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Msh2P43247 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Msh2P43247 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Msh2P43247 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Msh2P43247 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Msh2P43247 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Msh2P43247 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.53■□□□□ 0.4
Msh2P43247 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Msh2P43247 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Msh2P43247 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Msh2P43247 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.53■□□□□ 0.4
Msh2P43247 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.53■□□□□ 0.4
Msh2P43247 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Msh2P43247 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.53■□□□□ 0.4
Msh2P43247 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Msh2P43247 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Msh2P43247 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Msh2P43247 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.53■□□□□ 0.4
Msh2P43247 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Msh2P43247 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Msh2P43247 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Msh2P43247 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Msh2P43247 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Msh2P43247 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Msh2P43247 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Msh2P43247 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Msh2P43247 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.52■□□□□ 0.4
Msh2P43247 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Msh2P43247 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Msh2P43247 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms