Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sox5P35710 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox5P35710 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox5P35710 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.65■□□□□ 0.58
Sox5P35710 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sox5P35710 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sox5P35710 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sox5P35710 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox5P35710 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox5P35710 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox5P35710 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox5P35710 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox5P35710 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox5P35710 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sox5P35710 Gm42545-201ENSMUST00000202755 922 ntBASIC18.64■□□□□ 0.57
Sox5P35710 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox5P35710 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.64■□□□□ 0.57
Sox5P35710 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox5P35710 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox5P35710 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox5P35710 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sox5P35710 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.64■□□□□ 0.57
Sox5P35710 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox5P35710 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox5P35710 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox5P35710 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sox5P35710 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox5P35710 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sox5P35710 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.63■□□□□ 0.57
Sox5P35710 Gm13158-201ENSMUST00000122007 736 ntBASIC18.63■□□□□ 0.57
Sox5P35710 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sox5P35710 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox5P35710 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.63■□□□□ 0.57
Sox5P35710 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.63■□□□□ 0.57
Sox5P35710 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox5P35710 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox5P35710 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Sox5P35710 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox5P35710 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sox5P35710 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox5P35710 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox5P35710 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox5P35710 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox5P35710 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox5P35710 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Sox5P35710 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Sox5P35710 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox5P35710 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sox5P35710 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.62■□□□□ 0.57
Sox5P35710 Gm4974-201ENSMUST00000209974 875 ntBASIC18.62■□□□□ 0.57
Sox5P35710 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox5P35710 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox5P35710 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox5P35710 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox5P35710 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox5P35710 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox5P35710 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.62■□□□□ 0.57
Sox5P35710 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Sox5P35710 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox5P35710 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Sox5P35710 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Sox5P35710 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox5P35710 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox5P35710 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox5P35710 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox5P35710 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox5P35710 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox5P35710 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox5P35710 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox5P35710 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Sox5P35710 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox5P35710 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sox5P35710 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.61■□□□□ 0.57
Sox5P35710 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox5P35710 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.61■□□□□ 0.57
Sox5P35710 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
Sox5P35710 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sox5P35710 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.61■□□□□ 0.57
Sox5P35710 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox5P35710 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox5P35710 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Sox5P35710 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox5P35710 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox5P35710 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Sox5P35710 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox5P35710 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sox5P35710 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.6■□□□□ 0.57
Sox5P35710 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Sox5P35710 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox5P35710 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox5P35710 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sox5P35710 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox5P35710 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.6■□□□□ 0.57
Sox5P35710 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox5P35710 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Sox5P35710 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox5P35710 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Sox5P35710 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox5P35710 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sox5P35710 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms