Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Foxa1P35582 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Foxa1P35582 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Foxa1P35582 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Foxa1P35582 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Foxa1P35582 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Foxa1P35582 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Foxa1P35582 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Foxa1P35582 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Foxa1P35582 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Foxa1P35582 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Foxa1P35582 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Foxa1P35582 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Foxa1P35582 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Foxa1P35582 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Foxa1P35582 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Foxa1P35582 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Foxa1P35582 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Foxa1P35582 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Foxa1P35582 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.77■□□□□ 0.12
Foxa1P35582 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Foxa1P35582 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Foxa1P35582 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Foxa1P35582 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.77■□□□□ 0.12
Foxa1P35582 Gm11539-201ENSMUST00000119837 557 ntBASIC15.77■□□□□ 0.12
Foxa1P35582 Gm13436-201ENSMUST00000120418 567 ntBASIC15.77■□□□□ 0.12
Foxa1P35582 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.77■□□□□ 0.12
Foxa1P35582 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.77■□□□□ 0.12
Foxa1P35582 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Foxa1P35582 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.77■□□□□ 0.12
Foxa1P35582 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Foxa1P35582 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Foxa1P35582 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Foxa1P35582 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Foxa1P35582 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Foxa1P35582 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Foxa1P35582 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Foxa1P35582 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Foxa1P35582 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Foxa1P35582 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Foxa1P35582 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Foxa1P35582 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Foxa1P35582 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.76■□□□□ 0.11
Foxa1P35582 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Foxa1P35582 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Foxa1P35582 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Foxa1P35582 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Foxa1P35582 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Foxa1P35582 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Foxa1P35582 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Foxa1P35582 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Foxa1P35582 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Foxa1P35582 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Foxa1P35582 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Foxa1P35582 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Foxa1P35582 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Foxa1P35582 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Foxa1P35582 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Foxa1P35582 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Foxa1P35582 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Foxa1P35582 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.76■□□□□ 0.11
Foxa1P35582 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.76■□□□□ 0.11
Foxa1P35582 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.76■□□□□ 0.11
Foxa1P35582 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Foxa1P35582 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.76■□□□□ 0.11
Foxa1P35582 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Foxa1P35582 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Foxa1P35582 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Foxa1P35582 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.76■□□□□ 0.11
Foxa1P35582 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Foxa1P35582 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Foxa1P35582 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.76■□□□□ 0.11
Foxa1P35582 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Foxa1P35582 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Foxa1P35582 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Foxa1P35582 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Foxa1P35582 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.75■□□□□ 0.11
Foxa1P35582 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Foxa1P35582 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Foxa1P35582 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Foxa1P35582 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Foxa1P35582 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Foxa1P35582 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Foxa1P35582 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Foxa1P35582 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Foxa1P35582 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Foxa1P35582 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Foxa1P35582 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Foxa1P35582 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Foxa1P35582 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Foxa1P35582 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Foxa1P35582 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Foxa1P35582 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Foxa1P35582 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Foxa1P35582 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Foxa1P35582 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Foxa1P35582 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Foxa1P35582 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Foxa1P35582 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Foxa1P35582 Gm43799-201ENSMUST00000201845 579 ntBASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms