Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col2a1P28481 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Col2a1P28481 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col2a1P28481 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Col2a1P28481 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.36■□□□□ 0.69
Col2a1P28481 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col2a1P28481 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.36■□□□□ 0.69
Col2a1P28481 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col2a1P28481 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Col2a1P28481 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col2a1P28481 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col2a1P28481 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.35■□□□□ 0.69
Col2a1P28481 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Col2a1P28481 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col2a1P28481 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Col2a1P28481 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col2a1P28481 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col2a1P28481 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col2a1P28481 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
Col2a1P28481 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.35■□□□□ 0.69
Col2a1P28481 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col2a1P28481 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Col2a1P28481 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.34■□□□□ 0.69
Col2a1P28481 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Col2a1P28481 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col2a1P28481 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col2a1P28481 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col2a1P28481 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Col2a1P28481 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col2a1P28481 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col2a1P28481 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.34■□□□□ 0.69
Col2a1P28481 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col2a1P28481 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col2a1P28481 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Col2a1P28481 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col2a1P28481 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col2a1P28481 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col2a1P28481 Gm24589-201ENSMUST00000116692 94 ntBASIC19.33■□□□□ 0.68
Col2a1P28481 Gm12895-201ENSMUST00000122214 226 ntBASIC19.33■□□□□ 0.68
Col2a1P28481 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Col2a1P28481 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.33■□□□□ 0.68
Col2a1P28481 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col2a1P28481 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.33■□□□□ 0.68
Col2a1P28481 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Col2a1P28481 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Col2a1P28481 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.32■□□□□ 0.68
Col2a1P28481 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col2a1P28481 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Col2a1P28481 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col2a1P28481 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.32■□□□□ 0.68
Col2a1P28481 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col2a1P28481 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col2a1P28481 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Col2a1P28481 Gm13312-201ENSMUST00000119631 718 ntBASIC19.32■□□□□ 0.68
Col2a1P28481 Gm10052-201ENSMUST00000168019 960 ntBASIC19.32■□□□□ 0.68
Col2a1P28481 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
Col2a1P28481 Gm44430-201ENSMUST00000203376 995 ntBASIC19.32■□□□□ 0.68
Col2a1P28481 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col2a1P28481 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col2a1P28481 Gm7729-201ENSMUST00000050143 801 ntBASIC19.32■□□□□ 0.68
Col2a1P28481 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col2a1P28481 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Col2a1P28481 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Col2a1P28481 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col2a1P28481 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col2a1P28481 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col2a1P28481 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.32■□□□□ 0.68
Col2a1P28481 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col2a1P28481 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Col2a1P28481 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col2a1P28481 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Col2a1P28481 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col2a1P28481 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col2a1P28481 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col2a1P28481 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col2a1P28481 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Col2a1P28481 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Col2a1P28481 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col2a1P28481 Birc2-201ENSMUST00000054878 378 ntBASIC19.31■□□□□ 0.68
Col2a1P28481 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Col2a1P28481 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Col2a1P28481 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col2a1P28481 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col2a1P28481 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col2a1P28481 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col2a1P28481 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col2a1P28481 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Col2a1P28481 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col2a1P28481 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col2a1P28481 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col2a1P28481 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col2a1P28481 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Col2a1P28481 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.3■□□□□ 0.68
Col2a1P28481 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col2a1P28481 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
Col2a1P28481 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col2a1P28481 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.3■□□□□ 0.68
Col2a1P28481 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col2a1P28481 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Col2a1P28481 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms