Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.91■□□□□ 0.46
H2afxP27661 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
H2afxP27661 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
H2afxP27661 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
H2afxP27661 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.91■□□□□ 0.46
H2afxP27661 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
H2afxP27661 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
H2afxP27661 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
H2afxP27661 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
H2afxP27661 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
H2afxP27661 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
H2afxP27661 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
H2afxP27661 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
H2afxP27661 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
H2afxP27661 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
H2afxP27661 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
H2afxP27661 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
H2afxP27661 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
H2afxP27661 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
H2afxP27661 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
H2afxP27661 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.9■□□□□ 0.46
H2afxP27661 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
H2afxP27661 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
H2afxP27661 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
H2afxP27661 Gm43173-201ENSMUST00000202246 593 ntBASIC17.9■□□□□ 0.46
H2afxP27661 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
H2afxP27661 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
H2afxP27661 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
H2afxP27661 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
H2afxP27661 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
H2afxP27661 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
H2afxP27661 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
H2afxP27661 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
H2afxP27661 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
H2afxP27661 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
H2afxP27661 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.46
H2afxP27661 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
H2afxP27661 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
H2afxP27661 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H2afxP27661 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.89■□□□□ 0.45
H2afxP27661 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H2afxP27661 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
H2afxP27661 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.89■□□□□ 0.45
H2afxP27661 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H2afxP27661 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.89■□□□□ 0.45
H2afxP27661 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.89■□□□□ 0.45
H2afxP27661 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H2afxP27661 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
H2afxP27661 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H2afxP27661 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H2afxP27661 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H2afxP27661 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H2afxP27661 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
H2afxP27661 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H2afxP27661 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.89■□□□□ 0.45
H2afxP27661 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H2afxP27661 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
H2afxP27661 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
H2afxP27661 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.88■□□□□ 0.45
H2afxP27661 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
H2afxP27661 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
H2afxP27661 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
H2afxP27661 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
H2afxP27661 Gm10418-201ENSMUST00000100943 576 ntBASIC17.88■□□□□ 0.45
H2afxP27661 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.88■□□□□ 0.45
H2afxP27661 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
H2afxP27661 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
H2afxP27661 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.88■□□□□ 0.45
H2afxP27661 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
H2afxP27661 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
H2afxP27661 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
H2afxP27661 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
H2afxP27661 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
H2afxP27661 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
H2afxP27661 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
H2afxP27661 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
H2afxP27661 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
H2afxP27661 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
H2afxP27661 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.87■□□□□ 0.45
H2afxP27661 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
H2afxP27661 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
H2afxP27661 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
H2afxP27661 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
H2afxP27661 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
H2afxP27661 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
H2afxP27661 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.87■□□□□ 0.45
H2afxP27661 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
H2afxP27661 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
H2afxP27661 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
H2afxP27661 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
H2afxP27661 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
H2afxP27661 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
H2afxP27661 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.87■□□□□ 0.45
H2afxP27661 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
H2afxP27661 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
H2afxP27661 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H2afxP27661 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H2afxP27661 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
H2afxP27661 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
H2afxP27661 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms