Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nfkb1P25799 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.54■□□□□ 0.4
Nfkb1P25799 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nfkb1P25799 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Nfkb1P25799 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nfkb1P25799 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nfkb1P25799 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nfkb1P25799 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nfkb1P25799 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Nfkb1P25799 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nfkb1P25799 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nfkb1P25799 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nfkb1P25799 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Nfkb1P25799 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nfkb1P25799 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nfkb1P25799 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Nfkb1P25799 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nfkb1P25799 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nfkb1P25799 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nfkb1P25799 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nfkb1P25799 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nfkb1P25799 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nfkb1P25799 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nfkb1P25799 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.52■□□□□ 0.4
Nfkb1P25799 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nfkb1P25799 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nfkb1P25799 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nfkb1P25799 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nfkb1P25799 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
Nfkb1P25799 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nfkb1P25799 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Nfkb1P25799 Gm26039-201ENSMUST00000158152 144 ntBASIC17.52■□□□□ 0.4
Nfkb1P25799 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.52■□□□□ 0.4
Nfkb1P25799 Gm5587-201ENSMUST00000206270 674 ntBASIC17.52■□□□□ 0.4
Nfkb1P25799 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nfkb1P25799 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nfkb1P25799 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nfkb1P25799 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nfkb1P25799 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nfkb1P25799 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.52■□□□□ 0.4
Nfkb1P25799 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Nfkb1P25799 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nfkb1P25799 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nfkb1P25799 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nfkb1P25799 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nfkb1P25799 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Nfkb1P25799 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nfkb1P25799 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nfkb1P25799 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.51■□□□□ 0.39
Nfkb1P25799 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nfkb1P25799 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nfkb1P25799 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nfkb1P25799 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nfkb1P25799 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.51■□□□□ 0.39
Nfkb1P25799 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nfkb1P25799 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nfkb1P25799 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.51■□□□□ 0.39
Nfkb1P25799 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nfkb1P25799 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nfkb1P25799 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nfkb1P25799 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nfkb1P25799 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Nfkb1P25799 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nfkb1P25799 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nfkb1P25799 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Nfkb1P25799 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nfkb1P25799 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nfkb1P25799 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nfkb1P25799 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nfkb1P25799 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nfkb1P25799 Gm14859-201ENSMUST00000117752 357 ntBASIC17.5■□□□□ 0.39
Nfkb1P25799 Gm9013-201ENSMUST00000132939 882 ntBASIC17.5■□□□□ 0.39
Nfkb1P25799 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nfkb1P25799 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nfkb1P25799 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.5■□□□□ 0.39
Nfkb1P25799 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nfkb1P25799 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.5■□□□□ 0.39
Nfkb1P25799 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.5■□□□□ 0.39
Nfkb1P25799 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nfkb1P25799 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nfkb1P25799 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nfkb1P25799 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nfkb1P25799 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nfkb1P25799 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Nfkb1P25799 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nfkb1P25799 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nfkb1P25799 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nfkb1P25799 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Nfkb1P25799 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nfkb1P25799 Actl10-202ENSMUST00000226583 1501 ntBASIC17.49■□□□□ 0.39
Nfkb1P25799 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nfkb1P25799 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nfkb1P25799 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Nfkb1P25799 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Nfkb1P25799 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nfkb1P25799 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.49■□□□□ 0.39
Nfkb1P25799 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nfkb1P25799 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nfkb1P25799 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nfkb1P25799 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms