Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Irf8P23611 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.4■□□□□ 0.54
Irf8P23611 Gm6433-201ENSMUST00000118634 875 ntBASIC18.4■□□□□ 0.54
Irf8P23611 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
Irf8P23611 Gm7889-201ENSMUST00000185591 958 ntBASIC18.4■□□□□ 0.54
Irf8P23611 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Irf8P23611 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Irf8P23611 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Irf8P23611 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.4■□□□□ 0.54
Irf8P23611 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Irf8P23611 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.4■□□□□ 0.54
Irf8P23611 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Irf8P23611 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Irf8P23611 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Irf8P23611 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Irf8P23611 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.39■□□□□ 0.53
Irf8P23611 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
Irf8P23611 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Irf8P23611 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Irf8P23611 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Irf8P23611 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Irf8P23611 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Irf8P23611 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Irf8P23611 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Irf8P23611 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Irf8P23611 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Irf8P23611 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Irf8P23611 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Irf8P23611 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.38■□□□□ 0.53
Irf8P23611 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Irf8P23611 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.38■□□□□ 0.53
Irf8P23611 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Irf8P23611 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Irf8P23611 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Irf8P23611 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Irf8P23611 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Irf8P23611 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.38■□□□□ 0.53
Irf8P23611 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Irf8P23611 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Irf8P23611 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Irf8P23611 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Irf8P23611 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Irf8P23611 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Irf8P23611 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Irf8P23611 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Irf8P23611 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Irf8P23611 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.37■□□□□ 0.53
Irf8P23611 Gm45058-201ENSMUST00000205810 766 ntBASIC18.37■□□□□ 0.53
Irf8P23611 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Irf8P23611 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.37■□□□□ 0.53
Irf8P23611 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Irf8P23611 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Irf8P23611 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Irf8P23611 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Irf8P23611 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.37■□□□□ 0.53
Irf8P23611 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Irf8P23611 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Irf8P23611 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Irf8P23611 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.37■□□□□ 0.53
Irf8P23611 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Irf8P23611 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Irf8P23611 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.36■□□□□ 0.53
Irf8P23611 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Irf8P23611 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Irf8P23611 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.36■□□□□ 0.53
Irf8P23611 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Irf8P23611 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Irf8P23611 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Irf8P23611 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Irf8P23611 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.36■□□□□ 0.53
Irf8P23611 Gm18959-201ENSMUST00000208954 655 ntBASIC18.36■□□□□ 0.53
Irf8P23611 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Irf8P23611 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Irf8P23611 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Irf8P23611 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Irf8P23611 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Irf8P23611 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Irf8P23611 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Irf8P23611 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Irf8P23611 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Irf8P23611 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Irf8P23611 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Irf8P23611 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Irf8P23611 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Irf8P23611 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Irf8P23611 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Irf8P23611 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Irf8P23611 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Irf8P23611 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Irf8P23611 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.35■□□□□ 0.53
Irf8P23611 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Irf8P23611 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Irf8P23611 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Irf8P23611 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Irf8P23611 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Irf8P23611 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Irf8P23611 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Irf8P23611 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Irf8P23611 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Irf8P23611 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms