Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxd8P23463 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxd8P23463 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Hoxd8P23463 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxd8P23463 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxd8P23463 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxd8P23463 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.61■□□□□ 0.41
Hoxd8P23463 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxd8P23463 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxd8P23463 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hoxd8P23463 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxd8P23463 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxd8P23463 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Hoxd8P23463 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.6■□□□□ 0.41
Hoxd8P23463 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Hoxd8P23463 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.6■□□□□ 0.41
Hoxd8P23463 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
Hoxd8P23463 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
Hoxd8P23463 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
Hoxd8P23463 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.6■□□□□ 0.41
Hoxd8P23463 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxd8P23463 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxd8P23463 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxd8P23463 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxd8P23463 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hoxd8P23463 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxd8P23463 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Hoxd8P23463 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxd8P23463 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxd8P23463 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
Hoxd8P23463 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.59■□□□□ 0.41
Hoxd8P23463 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Hoxd8P23463 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxd8P23463 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxd8P23463 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxd8P23463 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.59■□□□□ 0.41
Hoxd8P23463 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxd8P23463 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hoxd8P23463 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hoxd8P23463 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
Hoxd8P23463 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hoxd8P23463 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxd8P23463 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxd8P23463 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxd8P23463 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxd8P23463 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxd8P23463 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.58■□□□□ 0.4
Hoxd8P23463 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxd8P23463 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.58■□□□□ 0.4
Hoxd8P23463 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.58■□□□□ 0.4
Hoxd8P23463 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxd8P23463 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.58■□□□□ 0.4
Hoxd8P23463 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxd8P23463 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxd8P23463 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxd8P23463 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.58■□□□□ 0.4
Hoxd8P23463 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxd8P23463 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxd8P23463 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxd8P23463 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxd8P23463 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxd8P23463 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxd8P23463 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.57■□□□□ 0.4
Hoxd8P23463 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.57■□□□□ 0.4
Hoxd8P23463 Gm27459-201ENSMUST00000184860 107 ntBASIC17.57■□□□□ 0.4
Hoxd8P23463 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.57■□□□□ 0.4
Hoxd8P23463 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxd8P23463 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxd8P23463 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxd8P23463 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxd8P23463 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxd8P23463 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxd8P23463 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxd8P23463 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxd8P23463 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxd8P23463 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Hoxd8P23463 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.56■□□□□ 0.4
Hoxd8P23463 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.56■□□□□ 0.4
Hoxd8P23463 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Hoxd8P23463 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxd8P23463 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxd8P23463 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.56■□□□□ 0.4
Hoxd8P23463 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxd8P23463 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxd8P23463 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxd8P23463 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxd8P23463 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.55■□□□□ 0.4
Hoxd8P23463 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxd8P23463 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxd8P23463 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxd8P23463 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxd8P23463 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxd8P23463 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxd8P23463 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.55■□□□□ 0.4
Hoxd8P23463 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxd8P23463 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Hoxd8P23463 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxd8P23463 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxd8P23463 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Hoxd8P23463 Gm13312-201ENSMUST00000119631 718 ntBASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms