Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
BdnfP21237 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BdnfP21237 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BdnfP21237 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BdnfP21237 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
BdnfP21237 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
BdnfP21237 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
BdnfP21237 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.34■□□□□ 0.21
BdnfP21237 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BdnfP21237 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BdnfP21237 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
BdnfP21237 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BdnfP21237 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
BdnfP21237 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BdnfP21237 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BdnfP21237 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BdnfP21237 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
BdnfP21237 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.34■□□□□ 0.21
BdnfP21237 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
BdnfP21237 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
BdnfP21237 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
BdnfP21237 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
BdnfP21237 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
BdnfP21237 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
BdnfP21237 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BdnfP21237 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BdnfP21237 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
BdnfP21237 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.33■□□□□ 0.2
BdnfP21237 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BdnfP21237 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BdnfP21237 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BdnfP21237 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BdnfP21237 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.33■□□□□ 0.2
BdnfP21237 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.33■□□□□ 0.2
BdnfP21237 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.33■□□□□ 0.2
BdnfP21237 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BdnfP21237 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BdnfP21237 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BdnfP21237 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
BdnfP21237 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
BdnfP21237 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BdnfP21237 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BdnfP21237 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BdnfP21237 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
BdnfP21237 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.32■□□□□ 0.2
BdnfP21237 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BdnfP21237 Gm11249-201ENSMUST00000117071 859 ntBASIC16.32■□□□□ 0.2
BdnfP21237 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BdnfP21237 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
BdnfP21237 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.32■□□□□ 0.2
BdnfP21237 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
BdnfP21237 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BdnfP21237 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
BdnfP21237 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BdnfP21237 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BdnfP21237 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
BdnfP21237 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BdnfP21237 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.32■□□□□ 0.2
BdnfP21237 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BdnfP21237 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BdnfP21237 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BdnfP21237 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BdnfP21237 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.31■□□□□ 0.2
BdnfP21237 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BdnfP21237 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.31■□□□□ 0.2
BdnfP21237 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BdnfP21237 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BdnfP21237 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BdnfP21237 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BdnfP21237 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BdnfP21237 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BdnfP21237 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
BdnfP21237 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
BdnfP21237 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.31■□□□□ 0.2
BdnfP21237 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BdnfP21237 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BdnfP21237 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BdnfP21237 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BdnfP21237 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.3■□□□□ 0.2
BdnfP21237 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BdnfP21237 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BdnfP21237 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BdnfP21237 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BdnfP21237 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BdnfP21237 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BdnfP21237 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BdnfP21237 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BdnfP21237 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BdnfP21237 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
BdnfP21237 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BdnfP21237 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
BdnfP21237 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BdnfP21237 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BdnfP21237 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.3■□□□□ 0.2
BdnfP21237 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
BdnfP21237 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.3■□□□□ 0.2
BdnfP21237 Gm10138-203ENSMUST00000206952 366 ntBASIC16.3■□□□□ 0.2
BdnfP21237 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.3■□□□□ 0.2
BdnfP21237 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
BdnfP21237 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms