Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cdx1P18111 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.77□□□□□ -0.2
Cdx1P18111 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
Cdx1P18111 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Cdx1P18111 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Cdx1P18111 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx1P18111 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC13.77□□□□□ -0.21
Cdx1P18111 Gm22240-201ENSMUST00000175225 82 ntBASIC13.77□□□□□ -0.21
Cdx1P18111 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx1P18111 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx1P18111 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx1P18111 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx1P18111 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx1P18111 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx1P18111 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx1P18111 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx1P18111 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx1P18111 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Cdx1P18111 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx1P18111 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx1P18111 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx1P18111 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.77□□□□□ -0.21
Cdx1P18111 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdx1P18111 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.76□□□□□ -0.21
Cdx1P18111 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx1P18111 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx1P18111 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC13.76□□□□□ -0.21
Cdx1P18111 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx1P18111 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Cdx1P18111 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx1P18111 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx1P18111 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC13.76□□□□□ -0.21
Cdx1P18111 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.76□□□□□ -0.21
Cdx1P18111 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC13.76□□□□□ -0.21
Cdx1P18111 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx1P18111 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Cdx1P18111 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx1P18111 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx1P18111 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx1P18111 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.76□□□□□ -0.21
Cdx1P18111 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx1P18111 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx1P18111 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx1P18111 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx1P18111 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx1P18111 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.76□□□□□ -0.21
Cdx1P18111 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx1P18111 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Cdx1P18111 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx1P18111 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx1P18111 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Cdx1P18111 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
Cdx1P18111 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.76□□□□□ -0.21
Cdx1P18111 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx1P18111 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx1P18111 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdx1P18111 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Cdx1P18111 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cdx1P18111 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdx1P18111 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdx1P18111 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdx1P18111 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdx1P18111 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cdx1P18111 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdx1P18111 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdx1P18111 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdx1P18111 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
Cdx1P18111 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdx1P18111 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Cdx1P18111 Gm12527-201ENSMUST00000117967 564 ntBASIC13.75□□□□□ -0.21
Cdx1P18111 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdx1P18111 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdx1P18111 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdx1P18111 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdx1P18111 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdx1P18111 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdx1P18111 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdx1P18111 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdx1P18111 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC13.75□□□□□ -0.21
Cdx1P18111 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cdx1P18111 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdx1P18111 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.75□□□□□ -0.21
Cdx1P18111 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.75□□□□□ -0.21
Cdx1P18111 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdx1P18111 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdx1P18111 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cdx1P18111 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdx1P18111 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdx1P18111 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdx1P18111 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cdx1P18111 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cdx1P18111 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdx1P18111 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
Cdx1P18111 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cdx1P18111 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdx1P18111 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Cdx1P18111 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC13.74□□□□□ -0.21
Cdx1P18111 Gm6211-202ENSMUST00000167849 925 ntBASIC13.74□□□□□ -0.21
Cdx1P18111 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cdx1P18111 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms