Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Usp53P15975 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp53P15975 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Usp53P15975 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp53P15975 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.74■□□□□ 0.75
Usp53P15975 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.74■□□□□ 0.75
Usp53P15975 Gm21362-201ENSMUST00000194272 928 ntBASIC19.74■□□□□ 0.75
Usp53P15975 Gm8969-201ENSMUST00000199694 526 ntBASIC19.74■□□□□ 0.75
Usp53P15975 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp53P15975 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp53P15975 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.74■□□□□ 0.75
Usp53P15975 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Usp53P15975 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.74■□□□□ 0.75
Usp53P15975 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp53P15975 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp53P15975 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp53P15975 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Usp53P15975 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp53P15975 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp53P15975 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Usp53P15975 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp53P15975 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.73■□□□□ 0.75
Usp53P15975 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.73■□□□□ 0.75
Usp53P15975 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp53P15975 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp53P15975 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp53P15975 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp53P15975 Gm7367-201ENSMUST00000057611 492 ntBASIC19.73■□□□□ 0.75
Usp53P15975 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp53P15975 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Usp53P15975 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Usp53P15975 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Usp53P15975 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Usp53P15975 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp53P15975 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Usp53P15975 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.73■□□□□ 0.75
Usp53P15975 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Usp53P15975 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp53P15975 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp53P15975 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Usp53P15975 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp53P15975 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Usp53P15975 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp53P15975 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp53P15975 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.72■□□□□ 0.75
Usp53P15975 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Usp53P15975 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.72■□□□□ 0.75
Usp53P15975 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Usp53P15975 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp53P15975 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.72■□□□□ 0.75
Usp53P15975 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.72■□□□□ 0.75
Usp53P15975 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Usp53P15975 Gm10819-201ENSMUST00000099988 561 ntBASIC19.72■□□□□ 0.75
Usp53P15975 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp53P15975 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Usp53P15975 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp53P15975 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp53P15975 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp53P15975 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.71■□□□□ 0.75
Usp53P15975 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp53P15975 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Usp53P15975 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.71■□□□□ 0.75
Usp53P15975 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp53P15975 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.71■□□□□ 0.75
Usp53P15975 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp53P15975 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp53P15975 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Usp53P15975 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Usp53P15975 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp53P15975 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp53P15975 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp53P15975 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp53P15975 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Usp53P15975 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp53P15975 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Usp53P15975 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Usp53P15975 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp53P15975 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp53P15975 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp53P15975 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp53P15975 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Usp53P15975 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.7■□□□□ 0.74
Usp53P15975 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp53P15975 Gm11355-201ENSMUST00000121120 306 ntBASIC19.7■□□□□ 0.74
Usp53P15975 Gm33142-201ENSMUST00000193913 867 ntBASIC19.7■□□□□ 0.74
Usp53P15975 Gm5587-201ENSMUST00000206270 674 ntBASIC19.7■□□□□ 0.74
Usp53P15975 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp53P15975 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Usp53P15975 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.7■□□□□ 0.74
Usp53P15975 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Usp53P15975 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Usp53P15975 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp53P15975 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Usp53P15975 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp53P15975 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Usp53P15975 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp53P15975 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp53P15975 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp53P15975 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp53P15975 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms