Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Rb1P13405 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rb1P13405 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rb1P13405 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rb1P13405 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.41■□□□□ 0.38
Rb1P13405 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rb1P13405 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rb1P13405 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rb1P13405 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rb1P13405 Gm6345-202ENSMUST00000180900 204 ntBASIC17.41■□□□□ 0.38
Rb1P13405 Gm10517-202ENSMUST00000192970 758 ntBASIC17.41■□□□□ 0.38
Rb1P13405 Gm33142-201ENSMUST00000193913 867 ntBASIC17.41■□□□□ 0.38
Rb1P13405 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.41■□□□□ 0.38
Rb1P13405 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.41■□□□□ 0.38
Rb1P13405 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.41■□□□□ 0.38
Rb1P13405 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rb1P13405 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rb1P13405 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rb1P13405 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rb1P13405 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rb1P13405 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rb1P13405 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rb1P13405 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rb1P13405 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rb1P13405 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rb1P13405 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rb1P13405 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rb1P13405 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rb1P13405 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Rb1P13405 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rb1P13405 Gm12085-201ENSMUST00000119263 940 ntBASIC17.4■□□□□ 0.38
Rb1P13405 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rb1P13405 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.4■□□□□ 0.38
Rb1P13405 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.4■□□□□ 0.38
Rb1P13405 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rb1P13405 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rb1P13405 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rb1P13405 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.4■□□□□ 0.38
Rb1P13405 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.4■□□□□ 0.38
Rb1P13405 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rb1P13405 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rb1P13405 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Rb1P13405 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rb1P13405 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rb1P13405 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Rb1P13405 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rb1P13405 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
Rb1P13405 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rb1P13405 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rb1P13405 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rb1P13405 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rb1P13405 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rb1P13405 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Rb1P13405 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rb1P13405 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rb1P13405 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rb1P13405 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rb1P13405 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.38■□□□□ 0.37
Rb1P13405 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rb1P13405 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rb1P13405 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rb1P13405 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Rb1P13405 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rb1P13405 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rb1P13405 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.38■□□□□ 0.37
Rb1P13405 Gm18101-201ENSMUST00000215769 548 ntBASIC17.38■□□□□ 0.37
Rb1P13405 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.38■□□□□ 0.37
Rb1P13405 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rb1P13405 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rb1P13405 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
Rb1P13405 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rb1P13405 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rb1P13405 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.38■□□□□ 0.37
Rb1P13405 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rb1P13405 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rb1P13405 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rb1P13405 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Rb1P13405 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rb1P13405 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Rb1P13405 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Rb1P13405 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rb1P13405 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rb1P13405 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rb1P13405 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rb1P13405 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rb1P13405 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rb1P13405 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rb1P13405 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.37■□□□□ 0.37
Rb1P13405 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.37■□□□□ 0.37
Rb1P13405 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Rb1P13405 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rb1P13405 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rb1P13405 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rb1P13405 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Rb1P13405 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Rb1P13405 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Rb1P13405 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rb1P13405 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rb1P13405 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Rb1P13405 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms