Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
UbbP0CG49 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UbbP0CG49 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UbbP0CG49 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
UbbP0CG49 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
UbbP0CG49 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UbbP0CG49 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
UbbP0CG49 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UbbP0CG49 Gm13401-201ENSMUST00000117074 291 ntBASIC14.85□□□□□ -0.03
UbbP0CG49 Mir6349-201ENSMUST00000184059 97 ntBASIC14.85□□□□□ -0.03
UbbP0CG49 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UbbP0CG49 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UbbP0CG49 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
UbbP0CG49 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UbbP0CG49 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
UbbP0CG49 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
UbbP0CG49 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UbbP0CG49 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
UbbP0CG49 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UbbP0CG49 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UbbP0CG49 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.84□□□□□ -0.03
UbbP0CG49 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UbbP0CG49 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UbbP0CG49 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UbbP0CG49 Gm26524-201ENSMUST00000192339 390 ntBASIC14.84□□□□□ -0.03
UbbP0CG49 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
UbbP0CG49 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UbbP0CG49 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UbbP0CG49 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
UbbP0CG49 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
UbbP0CG49 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
UbbP0CG49 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.83□□□□□ -0.04
UbbP0CG49 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UbbP0CG49 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UbbP0CG49 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
UbbP0CG49 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
UbbP0CG49 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
UbbP0CG49 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UbbP0CG49 Gm11927-201ENSMUST00000118472 759 ntBASIC14.83□□□□□ -0.04
UbbP0CG49 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UbbP0CG49 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UbbP0CG49 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
UbbP0CG49 Rab3c-203ENSMUST00000224180 967 ntBASIC14.83□□□□□ -0.04
UbbP0CG49 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
UbbP0CG49 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UbbP0CG49 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UbbP0CG49 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UbbP0CG49 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UbbP0CG49 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UbbP0CG49 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.83□□□□□ -0.04
UbbP0CG49 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UbbP0CG49 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UbbP0CG49 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UbbP0CG49 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UbbP0CG49 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
UbbP0CG49 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UbbP0CG49 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
UbbP0CG49 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
UbbP0CG49 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
UbbP0CG49 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UbbP0CG49 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.82□□□□□ -0.04
UbbP0CG49 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UbbP0CG49 Gm10849-201ENSMUST00000100397 618 ntBASIC14.82□□□□□ -0.04
UbbP0CG49 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
UbbP0CG49 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UbbP0CG49 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UbbP0CG49 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UbbP0CG49 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UbbP0CG49 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UbbP0CG49 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UbbP0CG49 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UbbP0CG49 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
UbbP0CG49 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.82□□□□□ -0.04
UbbP0CG49 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
UbbP0CG49 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
UbbP0CG49 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UbbP0CG49 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UbbP0CG49 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UbbP0CG49 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
UbbP0CG49 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
UbbP0CG49 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UbbP0CG49 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.81□□□□□ -0.04
UbbP0CG49 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UbbP0CG49 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
UbbP0CG49 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
UbbP0CG49 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14.81□□□□□ -0.04
UbbP0CG49 Gm13216-201ENSMUST00000117145 591 ntBASIC14.81□□□□□ -0.04
UbbP0CG49 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.81□□□□□ -0.04
UbbP0CG49 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UbbP0CG49 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UbbP0CG49 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
UbbP0CG49 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UbbP0CG49 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UbbP0CG49 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
UbbP0CG49 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UbbP0CG49 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UbbP0CG49 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UbbP0CG49 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
UbbP0CG49 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
UbbP0CG49 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms