Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.24■□□□□ 0.35
PdgfrbP05622 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PdgfrbP05622 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PdgfrbP05622 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PdgfrbP05622 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PdgfrbP05622 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PdgfrbP05622 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PdgfrbP05622 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PdgfrbP05622 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PdgfrbP05622 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PdgfrbP05622 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PdgfrbP05622 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PdgfrbP05622 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PdgfrbP05622 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.24■□□□□ 0.35
PdgfrbP05622 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.23■□□□□ 0.35
PdgfrbP05622 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.23■□□□□ 0.35
PdgfrbP05622 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PdgfrbP05622 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PdgfrbP05622 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PdgfrbP05622 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PdgfrbP05622 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PdgfrbP05622 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PdgfrbP05622 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PdgfrbP05622 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PdgfrbP05622 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PdgfrbP05622 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.22■□□□□ 0.35
PdgfrbP05622 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PdgfrbP05622 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.22■□□□□ 0.35
PdgfrbP05622 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.22■□□□□ 0.35
PdgfrbP05622 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PdgfrbP05622 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PdgfrbP05622 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PdgfrbP05622 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PdgfrbP05622 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PdgfrbP05622 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.22■□□□□ 0.35
PdgfrbP05622 Gm9731-201ENSMUST00000209480 747 ntBASIC17.22■□□□□ 0.35
PdgfrbP05622 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PdgfrbP05622 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PdgfrbP05622 Odf3b-204ENSMUST00000227834 930 ntBASIC17.22■□□□□ 0.35
PdgfrbP05622 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PdgfrbP05622 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.22■□□□□ 0.35
PdgfrbP05622 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PdgfrbP05622 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PdgfrbP05622 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PdgfrbP05622 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PdgfrbP05622 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PdgfrbP05622 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PdgfrbP05622 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PdgfrbP05622 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PdgfrbP05622 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PdgfrbP05622 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.21■□□□□ 0.35
PdgfrbP05622 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PdgfrbP05622 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.21■□□□□ 0.35
PdgfrbP05622 Gm21814-202ENSMUST00000203277 873 ntBASIC17.21■□□□□ 0.35
PdgfrbP05622 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.21■□□□□ 0.35
PdgfrbP05622 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PdgfrbP05622 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PdgfrbP05622 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PdgfrbP05622 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PdgfrbP05622 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
PdgfrbP05622 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PdgfrbP05622 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PdgfrbP05622 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PdgfrbP05622 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PdgfrbP05622 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PdgfrbP05622 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PdgfrbP05622 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PdgfrbP05622 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PdgfrbP05622 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
PdgfrbP05622 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PdgfrbP05622 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PdgfrbP05622 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PdgfrbP05622 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PdgfrbP05622 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PdgfrbP05622 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PdgfrbP05622 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PdgfrbP05622 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
PdgfrbP05622 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PdgfrbP05622 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PdgfrbP05622 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PdgfrbP05622 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PdgfrbP05622 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
PdgfrbP05622 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PdgfrbP05622 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PdgfrbP05622 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PdgfrbP05622 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PdgfrbP05622 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PdgfrbP05622 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PdgfrbP05622 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PdgfrbP05622 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PdgfrbP05622 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PdgfrbP05622 Gm5417-201ENSMUST00000079706 384 ntBASIC17.19■□□□□ 0.34
PdgfrbP05622 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PdgfrbP05622 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PdgfrbP05622 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
PdgfrbP05622 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PdgfrbP05622 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PdgfrbP05622 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PdgfrbP05622 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PdgfrbP05622 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms