Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
P04224 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.02■□□□□ -0
P04224 Gm2011-201ENSMUST00000203124 1263 ntBASIC15.02■□□□□ -0
P04224 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.02■□□□□ -0
P04224 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
P04224 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
P04224 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
P04224 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
P04224 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.02□□□□□ -0.01
P04224 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
P04224 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
P04224 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.02□□□□□ -0.01
P04224 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
P04224 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.02□□□□□ -0.01
P04224 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
P04224 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
P04224 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
P04224 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
P04224 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.01□□□□□ -0.01
P04224 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.01□□□□□ -0.01
P04224 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
P04224 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
P04224 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
P04224 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
P04224 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
P04224 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC15.01□□□□□ -0.01
P04224 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
P04224 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
P04224 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
P04224 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
P04224 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
P04224 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
P04224 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
P04224 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
P04224 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15□□□□□ -0.01
P04224 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
P04224 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
P04224 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
P04224 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
P04224 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
P04224 Gm42778-201ENSMUST00000199644 553 ntBASIC15□□□□□ -0.01
P04224 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
P04224 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
P04224 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
P04224 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
P04224 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15□□□□□ -0.01
P04224 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15□□□□□ -0.01
P04224 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15□□□□□ -0.01
P04224 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
P04224 Gm14026-201ENSMUST00000120625 1789 ntBASIC15□□□□□ -0.01
P04224 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
P04224 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
P04224 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
P04224 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
P04224 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
P04224 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
P04224 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
P04224 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
P04224 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
P04224 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
P04224 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
P04224 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
P04224 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
P04224 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.99□□□□□ -0.01
P04224 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
P04224 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
P04224 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
P04224 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC14.99□□□□□ -0.01
P04224 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
P04224 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
P04224 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
P04224 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.99□□□□□ -0.01
P04224 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
P04224 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
P04224 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
P04224 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
P04224 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
P04224 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
P04224 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
P04224 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
P04224 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.98□□□□□ -0.01
P04224 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
P04224 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
P04224 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.98□□□□□ -0.01
P04224 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
P04224 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
P04224 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
P04224 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.98□□□□□ -0.01
P04224 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
P04224 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
P04224 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
P04224 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.98□□□□□ -0.01
P04224 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
P04224 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
P04224 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
P04224 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
P04224 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.97□□□□□ -0.01
P04224 Idnk-204ENSMUST00000226010 1898 ntBASIC14.97□□□□□ -0.01
P04224 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
P04224 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms