Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Igh-VJ558P01758 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Igh-VJ558P01758 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.74□□□□□ -0.05
Igh-VJ558P01758 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Igh-VJ558P01758 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.74□□□□□ -0.05
Igh-VJ558P01758 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.74□□□□□ -0.05
Igh-VJ558P01758 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Igh-VJ558P01758 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Igh-VJ558P01758 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Igh-VJ558P01758 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Igh-VJ558P01758 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.74□□□□□ -0.05
Igh-VJ558P01758 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.74□□□□□ -0.05
Igh-VJ558P01758 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Igh-VJ558P01758 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.74□□□□□ -0.05
Igh-VJ558P01758 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Igh-VJ558P01758 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Igh-VJ558P01758 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Igh-VJ558P01758 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Igh-VJ558P01758 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Igh-VJ558P01758 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Igh-VJ558P01758 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
Igh-VJ558P01758 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Igh-VJ558P01758 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.73□□□□□ -0.05
Igh-VJ558P01758 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Igh-VJ558P01758 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Igh-VJ558P01758 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.73□□□□□ -0.05
Igh-VJ558P01758 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.73□□□□□ -0.05
Igh-VJ558P01758 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Igh-VJ558P01758 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Igh-VJ558P01758 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Igh-VJ558P01758 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Igh-VJ558P01758 Gm10812-201ENSMUST00000099864 546 ntBASIC14.73□□□□□ -0.05
Igh-VJ558P01758 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Igh-VJ558P01758 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Igh-VJ558P01758 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Igh-VJ558P01758 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Igh-VJ558P01758 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Igh-VJ558P01758 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Igh-VJ558P01758 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Igh-VJ558P01758 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Igh-VJ558P01758 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Igh-VJ558P01758 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Igh-VJ558P01758 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Igh-VJ558P01758 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Igh-VJ558P01758 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Igh-VJ558P01758 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Igh-VJ558P01758 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Igh-VJ558P01758 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Igh-VJ558P01758 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Igh-VJ558P01758 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.72□□□□□ -0.05
Igh-VJ558P01758 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Igh-VJ558P01758 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Igh-VJ558P01758 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.72□□□□□ -0.05
Igh-VJ558P01758 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Igh-VJ558P01758 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Igh-VJ558P01758 Mir5122-201ENSMUST00000175004 89 ntBASIC14.72□□□□□ -0.05
Igh-VJ558P01758 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.72□□□□□ -0.05
Igh-VJ558P01758 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Igh-VJ558P01758 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Igh-VJ558P01758 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Igh-VJ558P01758 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.72□□□□□ -0.05
Igh-VJ558P01758 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Igh-VJ558P01758 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Igh-VJ558P01758 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Igh-VJ558P01758 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Igh-VJ558P01758 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Igh-VJ558P01758 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Igh-VJ558P01758 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Igh-VJ558P01758 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Igh-VJ558P01758 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Igh-VJ558P01758 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Igh-VJ558P01758 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Igh-VJ558P01758 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Igh-VJ558P01758 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Igh-VJ558P01758 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Igh-VJ558P01758 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Igh-VJ558P01758 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.05
Igh-VJ558P01758 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Igh-VJ558P01758 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Igh-VJ558P01758 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Igh-VJ558P01758 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.71□□□□□ -0.05
Igh-VJ558P01758 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Igh-VJ558P01758 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Igh-VJ558P01758 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Igh-VJ558P01758 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Igh-VJ558P01758 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Igh-VJ558P01758 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Igh-VJ558P01758 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Igh-VJ558P01758 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Igh-VJ558P01758 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Igh-VJ558P01758 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Igh-VJ558P01758 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Igh-VJ558P01758 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.7□□□□□ -0.06
Igh-VJ558P01758 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Igh-VJ558P01758 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Igh-VJ558P01758 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Igh-VJ558P01758 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Igh-VJ558P01758 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.7□□□□□ -0.06
Igh-VJ558P01758 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Igh-VJ558P01758 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms