Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Hdac3O88895 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.26■□□□□ 0.03
Hdac3O88895 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hdac3O88895 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hdac3O88895 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.26■□□□□ 0.03
Hdac3O88895 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hdac3O88895 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hdac3O88895 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.26■□□□□ 0.03
Hdac3O88895 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hdac3O88895 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hdac3O88895 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Hdac3O88895 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.26■□□□□ 0.03
Hdac3O88895 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hdac3O88895 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.26■□□□□ 0.03
Hdac3O88895 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hdac3O88895 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hdac3O88895 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.25■□□□□ 0.03
Hdac3O88895 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hdac3O88895 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hdac3O88895 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Hdac3O88895 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hdac3O88895 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.25■□□□□ 0.03
Hdac3O88895 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hdac3O88895 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.25■□□□□ 0.03
Hdac3O88895 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hdac3O88895 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hdac3O88895 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hdac3O88895 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hdac3O88895 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hdac3O88895 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hdac3O88895 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hdac3O88895 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hdac3O88895 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hdac3O88895 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Hdac3O88895 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hdac3O88895 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hdac3O88895 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.25■□□□□ 0.03
Hdac3O88895 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hdac3O88895 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hdac3O88895 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hdac3O88895 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hdac3O88895 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hdac3O88895 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
Hdac3O88895 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.24■□□□□ 0.03
Hdac3O88895 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hdac3O88895 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hdac3O88895 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hdac3O88895 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hdac3O88895 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.24■□□□□ 0.03
Hdac3O88895 Gm15378-201ENSMUST00000121894 207 ntBASIC15.24■□□□□ 0.03
Hdac3O88895 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hdac3O88895 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.24■□□□□ 0.03
Hdac3O88895 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hdac3O88895 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hdac3O88895 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hdac3O88895 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Hdac3O88895 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hdac3O88895 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hdac3O88895 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hdac3O88895 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Hdac3O88895 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hdac3O88895 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hdac3O88895 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hdac3O88895 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.23■□□□□ 0.03
Hdac3O88895 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.23■□□□□ 0.03
Hdac3O88895 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hdac3O88895 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hdac3O88895 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Hdac3O88895 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hdac3O88895 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC15.23■□□□□ 0.03
Hdac3O88895 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hdac3O88895 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hdac3O88895 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.23■□□□□ 0.03
Hdac3O88895 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.23■□□□□ 0.03
Hdac3O88895 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.23■□□□□ 0.03
Hdac3O88895 Gm18025-201ENSMUST00000221733 862 ntBASIC15.23■□□□□ 0.03
Hdac3O88895 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hdac3O88895 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hdac3O88895 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hdac3O88895 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Hdac3O88895 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Hdac3O88895 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hdac3O88895 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hdac3O88895 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hdac3O88895 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hdac3O88895 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hdac3O88895 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hdac3O88895 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hdac3O88895 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hdac3O88895 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hdac3O88895 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hdac3O88895 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hdac3O88895 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hdac3O88895 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.22■□□□□ 0.03
Hdac3O88895 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hdac3O88895 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hdac3O88895 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.22■□□□□ 0.03
Hdac3O88895 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hdac3O88895 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hdac3O88895 Gm8520-201ENSMUST00000186517 868 ntBASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms