Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sh2d1aO88890 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sh2d1aO88890 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC12.09□□□□□ -0.47
Sh2d1aO88890 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sh2d1aO88890 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Sh2d1aO88890 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sh2d1aO88890 Trmt13-210ENSMUST00000198454 880 ntBASIC12.09□□□□□ -0.47
Sh2d1aO88890 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Sh2d1aO88890 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Sh2d1aO88890 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC12.09□□□□□ -0.47
Sh2d1aO88890 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sh2d1aO88890 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sh2d1aO88890 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sh2d1aO88890 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sh2d1aO88890 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Sh2d1aO88890 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Sh2d1aO88890 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sh2d1aO88890 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sh2d1aO88890 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sh2d1aO88890 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sh2d1aO88890 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sh2d1aO88890 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sh2d1aO88890 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sh2d1aO88890 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh2d1aO88890 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC12.08□□□□□ -0.48
Sh2d1aO88890 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh2d1aO88890 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC12.08□□□□□ -0.48
Sh2d1aO88890 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh2d1aO88890 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh2d1aO88890 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC12.08□□□□□ -0.48
Sh2d1aO88890 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC12.08□□□□□ -0.48
Sh2d1aO88890 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Sh2d1aO88890 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sh2d1aO88890 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sh2d1aO88890 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC12.08□□□□□ -0.48
Sh2d1aO88890 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sh2d1aO88890 Gm12527-201ENSMUST00000117967 564 ntBASIC12.08□□□□□ -0.48
Sh2d1aO88890 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh2d1aO88890 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sh2d1aO88890 Mir6349-201ENSMUST00000184059 97 ntBASIC12.08□□□□□ -0.48
Sh2d1aO88890 Gm37856-201ENSMUST00000191634 999 ntBASIC12.08□□□□□ -0.48
Sh2d1aO88890 Gm42545-201ENSMUST00000202755 922 ntBASIC12.08□□□□□ -0.48
Sh2d1aO88890 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Sh2d1aO88890 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Sh2d1aO88890 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh2d1aO88890 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh2d1aO88890 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh2d1aO88890 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Sh2d1aO88890 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC12.08□□□□□ -0.48
Sh2d1aO88890 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sh2d1aO88890 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh2d1aO88890 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Sh2d1aO88890 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Sh2d1aO88890 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh2d1aO88890 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1aO88890 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1aO88890 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1aO88890 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1aO88890 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Sh2d1aO88890 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1aO88890 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1aO88890 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sh2d1aO88890 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1aO88890 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Sh2d1aO88890 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC12.07□□□□□ -0.48
Sh2d1aO88890 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC12.07□□□□□ -0.48
Sh2d1aO88890 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC12.07□□□□□ -0.48
Sh2d1aO88890 CT025689.6-201ENSMUST00000224991 1104 ntBASIC12.07□□□□□ -0.48
Sh2d1aO88890 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Sh2d1aO88890 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1aO88890 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1aO88890 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1aO88890 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Sh2d1aO88890 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1aO88890 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Sh2d1aO88890 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC12.07□□□□□ -0.48
Sh2d1aO88890 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1aO88890 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sh2d1aO88890 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sh2d1aO88890 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC12.06□□□□□ -0.48
Sh2d1aO88890 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sh2d1aO88890 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sh2d1aO88890 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sh2d1aO88890 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sh2d1aO88890 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sh2d1aO88890 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sh2d1aO88890 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Sh2d1aO88890 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sh2d1aO88890 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sh2d1aO88890 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Sh2d1aO88890 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sh2d1aO88890 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sh2d1aO88890 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC12.06□□□□□ -0.48
Sh2d1aO88890 Gm6576-201ENSMUST00000169678 883 ntBASIC12.06□□□□□ -0.48
Sh2d1aO88890 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sh2d1aO88890 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Sh2d1aO88890 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sh2d1aO88890 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sh2d1aO88890 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sh2d1aO88890 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms