Protein–RNA interactions for Protein: O88632

Sema3f, Semaphorin-3F, mousemouse

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3fO88632 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Sema3fO88632 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sema3fO88632 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Sema3fO88632 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sema3fO88632 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
Sema3fO88632 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.66■□□□□ 0.74
Sema3fO88632 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sema3fO88632 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sema3fO88632 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sema3fO88632 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Sema3fO88632 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sema3fO88632 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sema3fO88632 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sema3fO88632 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sema3fO88632 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sema3fO88632 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sema3fO88632 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.65■□□□□ 0.74
Sema3fO88632 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sema3fO88632 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sema3fO88632 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Sema3fO88632 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sema3fO88632 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sema3fO88632 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sema3fO88632 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Sema3fO88632 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Sema3fO88632 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sema3fO88632 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sema3fO88632 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sema3fO88632 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Sema3fO88632 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Sema3fO88632 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Sema3fO88632 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sema3fO88632 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sema3fO88632 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sema3fO88632 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sema3fO88632 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sema3fO88632 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Sema3fO88632 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.64■□□□□ 0.73
Sema3fO88632 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.64■□□□□ 0.73
Sema3fO88632 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sema3fO88632 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sema3fO88632 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
Sema3fO88632 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sema3fO88632 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sema3fO88632 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.64■□□□□ 0.73
Sema3fO88632 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sema3fO88632 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sema3fO88632 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Sema3fO88632 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.63■□□□□ 0.73
Sema3fO88632 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sema3fO88632 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sema3fO88632 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sema3fO88632 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sema3fO88632 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.63■□□□□ 0.73
Sema3fO88632 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.63■□□□□ 0.73
Sema3fO88632 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.63■□□□□ 0.73
Sema3fO88632 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sema3fO88632 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sema3fO88632 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sema3fO88632 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sema3fO88632 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.63■□□□□ 0.73
Sema3fO88632 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sema3fO88632 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.63■□□□□ 0.73
Sema3fO88632 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sema3fO88632 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sema3fO88632 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Sema3fO88632 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sema3fO88632 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sema3fO88632 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sema3fO88632 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sema3fO88632 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sema3fO88632 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sema3fO88632 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sema3fO88632 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Sema3fO88632 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sema3fO88632 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sema3fO88632 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Sema3fO88632 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sema3fO88632 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sema3fO88632 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sema3fO88632 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sema3fO88632 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Sema3fO88632 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sema3fO88632 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sema3fO88632 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Sema3fO88632 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sema3fO88632 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sema3fO88632 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sema3fO88632 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sema3fO88632 Gm6623-201ENSMUST00000173570 544 ntBASIC19.61■□□□□ 0.73
Sema3fO88632 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sema3fO88632 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Sema3fO88632 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sema3fO88632 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Sema3fO88632 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Sema3fO88632 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sema3fO88632 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sema3fO88632 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.6■□□□□ 0.73
Sema3fO88632 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Sema3fO88632 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms