Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IkbkbO88351 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.89■□□□□ 0.61
IkbkbO88351 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
IkbkbO88351 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IkbkbO88351 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
IkbkbO88351 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IkbkbO88351 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
IkbkbO88351 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
IkbkbO88351 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IkbkbO88351 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IkbkbO88351 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IkbkbO88351 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.88■□□□□ 0.61
IkbkbO88351 Gm11539-201ENSMUST00000119837 557 ntBASIC18.88■□□□□ 0.61
IkbkbO88351 Gm13436-201ENSMUST00000120418 567 ntBASIC18.88■□□□□ 0.61
IkbkbO88351 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IkbkbO88351 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IkbkbO88351 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IkbkbO88351 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
IkbkbO88351 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
IkbkbO88351 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IkbkbO88351 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
IkbkbO88351 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IkbkbO88351 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
IkbkbO88351 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
IkbkbO88351 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IkbkbO88351 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IkbkbO88351 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
IkbkbO88351 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
IkbkbO88351 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
IkbkbO88351 Gm6433-201ENSMUST00000118634 875 ntBASIC18.87■□□□□ 0.61
IkbkbO88351 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
IkbkbO88351 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
IkbkbO88351 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
IkbkbO88351 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
IkbkbO88351 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
IkbkbO88351 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
IkbkbO88351 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
IkbkbO88351 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
IkbkbO88351 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
IkbkbO88351 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
IkbkbO88351 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
IkbkbO88351 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
IkbkbO88351 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
IkbkbO88351 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
IkbkbO88351 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
IkbkbO88351 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
IkbkbO88351 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IkbkbO88351 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
IkbkbO88351 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
IkbkbO88351 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.86■□□□□ 0.61
IkbkbO88351 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
IkbkbO88351 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
IkbkbO88351 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
IkbkbO88351 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
IkbkbO88351 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.86■□□□□ 0.61
IkbkbO88351 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.86■□□□□ 0.61
IkbkbO88351 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IkbkbO88351 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IkbkbO88351 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IkbkbO88351 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
IkbkbO88351 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IkbkbO88351 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IkbkbO88351 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
IkbkbO88351 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
IkbkbO88351 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IkbkbO88351 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IkbkbO88351 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IkbkbO88351 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
IkbkbO88351 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
IkbkbO88351 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
IkbkbO88351 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IkbkbO88351 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
IkbkbO88351 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
IkbkbO88351 Gm13559-201ENSMUST00000120476 863 ntBASIC18.85■□□□□ 0.61
IkbkbO88351 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.85■□□□□ 0.61
IkbkbO88351 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
IkbkbO88351 Gm38027-201ENSMUST00000192315 235 ntBASIC18.85■□□□□ 0.61
IkbkbO88351 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.85■□□□□ 0.61
IkbkbO88351 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IkbkbO88351 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IkbkbO88351 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
IkbkbO88351 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IkbkbO88351 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.85■□□□□ 0.61
IkbkbO88351 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
IkbkbO88351 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IkbkbO88351 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
IkbkbO88351 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.84■□□□□ 0.61
IkbkbO88351 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
IkbkbO88351 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
IkbkbO88351 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
IkbkbO88351 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IkbkbO88351 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IkbkbO88351 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IkbkbO88351 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IkbkbO88351 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
IkbkbO88351 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IkbkbO88351 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
IkbkbO88351 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
IkbkbO88351 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
IkbkbO88351 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms